Job Description P31062 Confidence 97.10% Date Thu Jan 5 11:46:59 GMT 2012 Rank 2 Aligned Residues 125 % Identity 12% Template c3hh0C_ PDB info PDB header:transcription regulator Chain: C: PDB Molecule:transcriptional regulator, merr family; PDBTitle: crystal strucure of a transcriptional regulator, merr family2 from bacillus cereus Resolution 2.67 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	E	V	N	K	K	Q	L	A	D	I	F	G	A	S	I	R	T	I	Q	N	W	Q	E	Q	G	M	P	V	L	R	G	G	G	K	G	N	E	V	L	Y	D	S	A	A	V	I	K	W	Y	A	E	R	D	A	E	I	E	N	E	K	L	R	R	E	V	E	E	L	L	Q	A	S	E	T	D	L	Q	P	G
Query Conservation
Alig confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	W	L	I	S	E	F	A	S	V	G	D	V	T	V	R	A	L	R	Y	Y	D	K	I	N	L	L	K	P	S	D	Y	T	E	G	G	H	R	L	Y	T	K	D	D	L	Y	V	L	Q	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													T	T												T	T	S	S			S				T	T	S															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.				.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.
Query SS confidence																																											.	.	.
Query Sequence		T	I	E	Y	E	R	H	R	L	T	R	A	Q	A	D	A	Q	E	L	K	N	A	R	D	S	A	E	V	V	E	T	A	F	C	T	F	V	L	S	R	I	.	.	.	A	G	E	I	A	S	I	L	D	G	I	P	L	S	V	Q	R	R	F	P	E	L	E	N	R	H	V	D	F	L	K	R	D	I	I	K
Query Conservation																																											.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.																					.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Q	S	F	K	H	L	G	F	S	L	G	E	I	Q	N	I	I	L	Q	R	D	I	E	T	E	V	F	L	R	Q	X	H	F	Q	R	E	V	L	L	A	E	Q	E	.	.	.	.	.	R	I	A	K	V	L	S	H	X	D	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	T													S	S																							.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.
Template SS confidence
																						52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.						.	.	.	.	100	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	N	K	A	A	A	L	D	E	L	I	P	G	L	L	S	E	Y	I	E	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	T	K	K	F	Q	K	E	E	R	V	N	V	A	L	F	S	S	F	L	Q	T
Template Known Secondary structure							T	T		S	S												T
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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