 |
Job Description | P31062 | Confidence | 68.35% | Date | Thu Jan 5 11:46:59 GMT 2012 |
Rank | 222 | Aligned Residues | 25 |
% Identity | 8% | Template | c2w7nA_ |
PDB info |
PDB header:transcription/dna | Chain: A: PDB Molecule:trfb transcriptional repressor protein; |
PDBTitle: crystal structure of kora bound to operator dna: insight2 into repressor cooperation in rp4 gene regulation
|
Resolution | 1.85 Å |
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | E | V | N | K | K | Q | L | A | D | I | F | G | A | S | I | R | T | I | Q | N | W | Q | E | Q |
Query Conservation |   |
|   |
|
|
|   |
|
|
|   |   |   |
|
|
|   |
|
|
|   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |
|
|   |   |   |
|
|
|
|
|   |
|   |   |   |
|
|
|
Template Sequence |   |
D | G | K | P | Q | A | T | F | A | T | S | L | G | L | T | R | G | A | V | S | Q | A | V | H | R |
Template Known Secondary structure |   |
T |
|
|
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
33 | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|