Job Description P31062 Confidence 39.65% Date Thu Jan 5 11:46:59 GMT 2012 Rank 387 Aligned Residues 28 % Identity 29% Template c2o8kA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:rna polymerase sigma factor rpon; PDBTitle: nmr structure of the sigma-54 rpon domain bound to the-242 promoter element Resolution UNK

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		3	.	.	.	.	.	.	10	.	.	.						.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30
Predicted Secondary structure													.	.	.	.	.													.
Query SS confidence													.	.	.	.	.													.
Query Sequence		V	N	K	K	Q	L	A	D	I	F	G	.	.	.	.	.	A	S	I	R	T	I	Q	N	W	Q	E	Q	.	G	M	P	V	L
Query Conservation													.	.	.	.	.													.
Alig confidence													.	.	.	.	.													.
Template Conservation
Template Sequence		Y	S	D	Q	E	I	A	N	I	L	K	E	K	G	F	K	V	A	R	R	T	V	A	K	Y	R	E	M	L	G	I	P	S	S
Template Known Secondary structure															T																T		S		S
Template Predicted Secondary structure
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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