Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9F9
Confidence86.05%DateThu Jan 5 11:10:06 GMT 2012
Rank203Aligned Residues59
% Identity24%Templated1yyva1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain HxlR-like
Resolution2.35

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50..... ....60......
Predicted Secondary structure 










.......
Query SS confidence 



















































. . . . . . .










Query Sequence  VKHLKTLQALRNCGSLAAAAATLHQTQSALSHQFSDLEQRLGFRLFVRKSQP. . . . . . . LRFTPQGEILL
Query Conservation 
  
  
  
   

 
 

  
 


 


  
  

  

  

 
    .......  

  
  
 
Alig confidence 




















.
















...









.......










Template Conservation 
   

  
  
  

 

 
.  

   

 

  
  ... 


 
      
  


 

  
  
 
Template Sequence  WGVLILVALRDGTHRFSDLRR. XGGVSEXLAQSLQALEQ. . . DGFLNRVSYPVVPPHVEYSLTPLGEQVS
Template Known Secondary structure  GGG


.
TT



...T

SSS

Template Predicted Secondary structure 





.




...











Template SS confidence 





































































   33......40.........50... ......60.........70 .........80.........90........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions