Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9F9
Confidence38.55%DateThu Jan 5 11:10:06 GMT 2012
Rank345Aligned Residues195
% Identity12%Templated1ixha_
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution0.98

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   93......100.........110.........120.........130.........140.........150. ........160.......
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Query Sequence  IAIECHSCIQWLTPALENFHKNWPQVEMDFKSGVTFDPQPALQQGELDLVMTSDILPRS. . . . . GLHYSPMFDYEVRLVL
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Template Sequence  LTGAGATFPAPVYAKWADTYQKETGNKVNYQGIGSSGGVKQIIANTVDFGASDAPLSDEKLAQEGLFQFPTVIGGVVLAV
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   168.170.........180....... ..190.........200.........210
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Query Sequence  APDHPLAAKTRITPEDLASE. . . . . . . . . . . . . . . . . . . . . . . . . . . TLLIYPVQRSRLDVWRHFLQPAG. . . . . . . . . .
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Template Sequence  NIPGLKSGELVLDGKTLGDIYLGKIKKWDDEAIAKLNPGLKLPSQNIAVVRRADGSGTSFVFTSYLAKVNEEWKNNVGTG
Template Known Secondary structure 

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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   211........220.........230... ......240.........250.....
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Query Sequence  . . . VSPSLKSVDNTLLLIQMVAARMG. IAALPHWVVESFERQGLVVTKT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  STVKWPIGLGGKGNDGIAAFVQRLPGAIGYVEYAYAKQNNLAYTKLISADGKPVSPTEENFANAAKGADWSKTFAQDLTN
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   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   256...260.........270... ......280.......
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Query Sequence  . . . . LGEGLWSRLYAAVRDGEQ. . . RQPVTEAFIRSARN
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Template Sequence  QKGEDAWPITSTTFILIHKDQKKPEQGTEVLKFFDWAYK
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SBSB
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   244.....250.........260.........270.........280..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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