Job Description P0A9F9 Confidence 99.71% Date Thu Jan 5 11:10:06 GMT 2012 Rank 24 Aligned Residues 206 % Identity 23% Template d1i6aa_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.30

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		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	R	L	R	I	A	I	E	C	H	S	C	I	Q	W	L	T	P	A	L	E	N	F	H	K	N	W	P	Q	V	E	M	D	F	K	S	G	V	T	F	D	P	Q	P	A	L	Q	Q	G	E	L	D	L	V	M	T	S	D	I	L	P	R	S	G	L	H	Y	S	P	M	F	D	Y	E	V	R	L	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G	P	L	H	I	G	L	I	P	T	V	G	P	Y	L	L	P	H	I	I	P	M	L	H	Q	T	F	P	K	L	E	M	Y	L	H	E	A	Q	T	H	Q	L	L	A	Q	L	D	S	G	K	L	D	A	V	I	L	A	L	V	K	E	S	E	A	F	I	E	V	P	L	F	D	E	P	M	L	L	A	I
Template Known Secondary structure											T	T	T																	T	T																				T	S		S								G	G	G	T	T	S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		A	P	D	H	P	L	A	A	K	T	R	I	T	P	E	D	L	A	S	E	T	L	L	I	Y	P	V	Q	R	S	R	L	D	V	W	R	H	F	L	Q	P	A	G	V	S	P	.	S	L	K	S	V	D	N	T	L	L	L	I	Q	M	V	A	A	R	M	G	I	A	A	L	P	H	W	V	V	E	S	F	E
Query Conservation																																																.
Alig confidence																																																.
Template Conservation
Template Sequence		Y	E	D	H	P	W	A	N	R	E	A	V	P	M	A	D	L	A	G	E	K	L	L	M	L	E	D	G	H	C	L	R	D	Q	A	M	G	F	C	F	E	A	G	A	D	E	D	T	H	F	R	A	T	S	L	E	T	L	R	N	M	V	A	A	G	S	G	I	T	L	L	P	A	L	A	V	P	P	E	R
Template Known Secondary structure			T	T	S	G	G	G	G		S				G	G	G	G	T	T	S						T	T	T	T		S	S		T	T	S	S		S	S		T	T	S					T	T	T	T	S											T	T	S		B					G	G	G	S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		247	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		R	Q	G	L	V	V	T	K	T	L	.	G	E	G	L	W	S	R	L	Y	A	A	V	R	D	G	E	Q	R	Q	P	V	T	E	A	F	I	R	S	A	R	N	H	A	C	D	H	L
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		K	R	D	G	V	V	Y	L	P	A	I	K	P	E	P	R	R	T	I	G	L	V	Y	R	P	G	S	P	L	R	S	R	Y	E	Q	L	A	E	A	I	R	A	R	M	D	G	H	F
Template Known Secondary structure				T	T								S	S												T	T		T	T																T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions