Job Description P0A9F9 Confidence 100.00% Date Thu Jan 5 11:10:06 GMT 2012 Rank 6 Aligned Residues 287 % Identity 20% Template c3ispA_ PDB info PDB header:transcription Chain: A: PDB Molecule:hth-type transcriptional regulator PDBTitle: crystal structure of argp from mycobacterium tuberculosis Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	V	K	H	L	K	T	L	Q	A	L	R	N	C	G	S	L	A	A	A	A	A	T	L	H	Q	T	Q	S	A	L	S	H	Q	F	S	D	L	E	Q	R	L	G	F	R	L	F	V	R	K	S	Q	P	L	R	F	T	P	Q	G	E	I	L	L	Q	L	A	N	Q	V	L	P	Q	I	S	Q	A	L	Q
Query Conservation
Alig confidence																																																				.
Template Conservation																																																				.
Template Sequence		L	D	G	P	Q	L	A	A	L	A	A	V	V	E	L	G	S	F	D	A	A	A	E	R	L	H	V	T	P	S	A	V	S	Q	R	I	K	S	L	E	Q	Q	V	G	Q	V	L	V	V	R	.	E	K	P	C	R	A	T	T	A	G	I	P	L	L	R	L	A	A	Q	T	A	L	L	E	S	E	A	L	A
Template Known Secondary structure				S													T							T	T	T	T																		T	S						.	S	S	S					G	G	G																		T	T
Template Predicted Secondary structure																																																				.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	C	N	E	P	Q	Q	T	R	L	R	I	A	I	E	C	H	S	C	I	Q	W	L	T	P	A	L	E	N	F	H	K	N	W	P	Q	V	E	M	D	F	K	S	G	V	T	F	D	P	Q	P	A	L	Q	Q	G	E	L	D	L	V	M	T	S	D	I	L	P	R	S	G	L	H	Y	S	P	M	F	D	Y
Query Conservation
Alig confidence																						.	.	.
Template Conservation																						.	.	.
Template Sequence		E	M	G	A	S	L	K	R	T	R	I	T	I	A	V	N	A	D	S	M	.	.	.	A	T	W	F	S	A	V	F	D	G	L	G	D	V	L	L	D	V	R	I	E	D	Q	D	H	S	A	R	L	L	R	E	G	V	A	M	G	A	V	T	T	E	R	N	P	V	P	G	C	R	V	H	P	L	G	E	M
Template Known Secondary structure		T	T			T	T															.	.	.		T	T	G	G	G	G	G	T	T			S																			T	T	S		S					S			S			T	T
Template Predicted Secondary structure																						.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.				.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		162	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		E	V	R	L	V	L	A	P	D	H	P	L	.	A	A	K	T	R	I	T	P	E	D	L	A	S	E	T	L	L	I	Y	P	V	Q	R	S	R	L	D	V	W	R	H	F	L	Q	P	A	G	V	S	P	S	L	K	S	V	D	N	T	L	L	L	I	Q	M	V	A	A	R	M	G	I	A	A	L	P	H	W
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		R	Y	L	P	V	A	S	R	P	F	V	Q	R	H	L	S	D	G	F	T	A	A	A	A	A	K	A	P	S	L	A	W	N	R	D	D	G	L	Q	D	M	L	V	R	K	A	F	R	R	A	I	T	R	P	T	H	F	V	P	T	T	E	G	F	T	A	A	A	R	A	G	L	G	W	G	M	F	P	E	K
Template Known Secondary structure																	T	T		S		T	T	T	T	T	T	S		B			S	S	T	T													S	S						B					S										T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	E	S	F	E	R	Q	G	L	V	V	T	K	T	L	G	E	G	L	W	S	R	L	Y	A	A	V	R	D	G	E	Q	R	Q	P	V	T	E	A	F	I	R	S	A	R	N	H	A	C	D	H	L	P	F
Query Conservation
Alig confidence																.	.	.
Template Conservation																.	.	.
Template Sequence		L	A	A	S	P	L	A	D	G	S	F	V	R	V	.	.	.	C	D	I	H	L	D	V	P	L	Y	W	Q	C	W	K	L	D	S	P	I	I	A	R	I	T	D	T	V	R	A	A	A	S	G	L	Y	R	G
Template Known Secondary structure										S	S				S	.	.	.	S	S													S	S																T	T	T	S	B
Template Predicted Secondary structure																.	.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.				.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions