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Job DescriptionP0A9F9
Confidence99.39%DateThu Jan 5 11:10:06 GMT 2012
Rank36Aligned Residues183
% Identity15%Templatec2qsxB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:putative transcriptional regulator, lysr family; PDBTitle: crystal structure of putative transcriptional regulator lysr from2 vibrio parahaemolyticus
Resolution1.64 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   91........100.........110.........120.........130.........140.........150.........160.........170
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Query Sequence  LRIAIECHSCIQWLTPALENFHKNWPQVEMDFKSGVTFDPQPALQQGELDLVMTSDILPRSGLHYSPMFDYEVRLVLAPD
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Template Sequence  LVVDVTPSFASLWLVPNINDFHQRHPNIRVKILTG. . . . . . . DGAVGESDLHVRCLPLSTHYEYSQLLCEETLLLIGNTN
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T
TT


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S




SS
S

TT
TT
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   18.20.........30.........40.........50.. .......60.........70.........80.........90
 
   171........180.........190.........200.........210.........220.........230.........240.........250
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Query Sequence  HPLAAKTRITPEDLASETLLIYPVQRSRLDVWRHFLQPAGVSPSLKSVDNTLLLIQMVAARMGIAALPHWVVESFERQGL
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Template Sequence  LP. . . . . . . KNQAISHYPFIPQTT. . . RPQLWEQFKQENDITYHSVGFEHFYLACEAVRXEKGLALLPDFXAQFSILRGD
Template Known Secondary structure  S
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GGGGS
B

BTT...
T



B
S

BSSTT

BTTS
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   95. ...100.........110. ........120.........130.........140.........150.........160....
 
   251...... ..260.........270.........280.........290
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Query Sequence  VVTKTLG. EGLWSRLYAAVRDGEQRQPVTEAFIRSARNHAC
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Template Sequence  IQHIGNLKLHSGYGYYVVIPNFRLTSRKVALFHDWLKDKLT
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GGGTT

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   172.......180.........190.........200.........210..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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