Job Description P77795 Confidence 97.84% Date Thu Jan 5 12:32:56 GMT 2012 Rank 120 Aligned Residues 157 % Identity 17% Template c3ldaA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:dna repair protein rad51; PDBTitle: yeast rad51 h352y filament interface mutant Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	D	G	E	F	F	S	M	L	G	P	S	G	S	G	K	T	T	C	L	R	L	I	A	G	F	E	Q	L	S	G	G	A	I	S	I	F	G	K	P	A	S	N	L	P	P	W	E	R	D	V	N	T	V	F	Q	D	Y	A	L	F	P	H	M	S	I	L	D	N	V	A	Y	G	L	M	V	K	G	V
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	E	T	G	S	I	T	E	L	F	G	E	F	R	T	G	K	S	Q	L	C	H	T	L	A	V	T	C	Q	I	P	L	.	.	.	.	.	.	.	.	.	.	.	D	I	G	G	G	E	G	K	C	L	Y	I	D	T	E	G	T	F	R	P	V	R	L	V	S	I	A	Q	R	F	G	L	D	P	D	D	A
Template Known Secondary structure				T	T	S							S	T	T	S	S												T	T	S		G	.	.	.	.	.	.	.	.	.	.	.	G	G	T			S	S							S	S	S														T	T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.												.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.				.	.	.	.	170					.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.						.	.	.	.
Query SS confidence																																																													.	.	.						.	.	.	.
Query Sequence		N	K	K	Q	R	H	A	M	A	Q	E	A	L	E	K	V	A	L	G	F	V	H	Q	R	K	P	S	Q	L	S	G	G	Q	R	Q	R	V	A	I	A	R	A	L	V	N	E	P	R	V	L	L	L	D	E	P	L	G	A	L	.	.	.	D	L	K	L	R	.	.	.	.	E	Q	M	Q	L	E	L	K	K
Query Conservation																																																													.	.	.						.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.						.	.	.						.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Sequence		L	N	N	V	A	Y	A	R	A	Y	N	A	D	H	Q	L	R	L	L	D	A	A	A	Q	M	M	S	E	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	F	S	L	I	V	V	D	.	S	V	M	A	L	Y	R	G	E	L	S	A	R	Q	M	H	L	A	K	F	M	R	A	L	Q	R
Template Known Secondary structure				T								S																		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	T	G	G	G	G
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.																	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	Q	S	L	G	I	T	F	I	F	V	T	H	D	Q	G	E	A	L	S	M	S	D	R	V	A	V	F	N	N	G	R
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		L	A	D	Q	F	G	V	A	V	V	V	T	N	Q	.	V	N	I	M	A	Y	S	S	T	T	R	L	G	F	K	K	G	K
Template Known Secondary structure																.									S									S
Template Predicted Secondary structure																.
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.		.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions