Return to main results Retrieve Phyre Job Id

Job DescriptionP77795
Confidence99.84%DateThu Jan 5 12:32:56 GMT 2012
Rank64Aligned Residues187
% Identity11%Templatec3a4mB_
PDB info PDB header:transferaseChain: B: PDB Molecule:l-seryl-trna(sec) kinase; PDBTitle: crystal structure of archaeal o-phosphoseryl-trna(sec)2 kinase
Resolution1.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.........60.........70.........80..... ....90.........100.......
Predicted Secondary structure 


























....


















Query SS confidence 





















































. . . .





















Query Sequence  FFSMLGPSGSGKTTCLRLIAGFEQLSGGAISIFGKPASNLPPWERDVNTVFQDY. . . . ALFPHMSILDNVAYGLMVKGVN
Query Conservation     


 








  
 
   
  
 
   
               
    ....                      
Alig confidence 





















































....





















Template Conservation 

 
 
  






   
        
 
                                                  
Template Sequence  LIILTGLPGVGKSTFSKNLAKILSKNNIDVIVLGSDLIRESFPVWKEKYEEFIKKSTYRLIDSALKNYWVIVDDTNYYNS
Template Known Secondary structure 

TTSSTT


TTTSSS

TTTTS
S


S
Template Predicted Secondary structure 





















Template SS confidence 















































































   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   108.110.........120.........130.........140.. .......150.........160.........170........
Predicted Secondary structure 













.........










Query SS confidence 


































. . . . . . . . .



































Query Sequence  KKQRHAMAQEALEKVALGFVHQRKPSQLSGGQRQR. . . . . . . . . VAIARALVNEPRVLLLDEPLGALDLKLREQMQLELK
Query Conservation                  
          

 
  

.........  

 

   
 






 
 

      
   
 
Alig confidence 


































.........



































Template Conservation                                
   
           
             


   

            
Template Sequence  MRRDLINIAKKYNKNYAIIYLKASLDVLIRRNIERGEKIPNEVIKKMYEKFDEPGKKYKWDEPFLIIDTTKDIDFNEIAK
Template Known Secondary structure  TT


TT
SS



TTSS
GGG

STTS


Template Predicted Secondary structure 





















Template SS confidence 















































































   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   179180.........190.........200...... ...210.........220
Predicted Secondary structure 






..





Query SS confidence 



























. .













Query Sequence  KLQQSLGITFIFVTHDQGEALSMSDRVA. . VFNNGRIEQVDSPR
Query Conservation   
    
 


 


         


 ..

  
 
   
   
Alig confidence 





..



















..













Template Conservation   
    ..  
  
                    
         
Template Sequence  KLIEKS. . KEIPKFNISDKIDKETRKIVSEYIKSKKLDKDKIKE
Template Known Secondary structure  ..TS




TT

Template Predicted Secondary structure 

..










Template SS confidence 











































   166...170. ........180.........190.........200.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions