Return to main results Retrieve Phyre Job Id

Job DescriptionP77795
Confidence96.44%DateThu Jan 5 12:32:56 GMT 2012
Rank328Aligned Residues133
% Identity19%Templatec2qbyB_
PDB info PDB header:replication/dnaChain: B: PDB Molecule:cell division control protein 6 homolog 3; PDBTitle: crystal structure of a heterodimer of cdc6/orc1 initiators2 bound to origin dna (from s. solfataricus)
Resolution3.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50.........60.........70.........80.........90.........100.......
Predicted Secondary structure 

















































Query SS confidence 















































































Query Sequence  KDGEFFSMLGPSGSGKTTCLRLIAGFEQLSGGAISIFGKPASNLPPWERDVNTVFQDYALFPHMSILDNVAYGLMVKGVN
Query Conservation    

   


 








  
 
   
  
 
   
               
                          
Alig confidence 





























..................................















Template Conservation       


 
  




 

      
   ..................................                
Template Sequence  EVKFSNLFLGLTGTGKTFVSKYIFNEIEEV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KKEDEEYKDVKQAYVN
Template Known Secondary structure 




TTSS..................................SSSSTT
Template Predicted Secondary structure 









..................................









Template SS confidence 















































































   53......60.........70.........80.. .......90........
 
   108.110.........120.........130.........140.........150.........160.........170.........180.......
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  KKQRHAMAQEALEKVALGFVHQRKPSQLSGGQRQRVAIARALVNEPRVLLLDEPLGALDLKLREQMQLELKKLQQSLGIT
Query Conservation                  
          

 
  

  

 

   
 






 
 

      
   
  
    
 
Alig confidence 







































































..





Template Conservation                                                    

              
  
  ..      
Template Sequence  CREVGGTPQAVLSSLAGKLTGFSVPKHGINLGEYIDKIKNGTRNIRAIIYLDEVDTLVKRRGGDIVLYQLLR. . SDANIS
Template Known Secondary structure 
S

S


SSSS
TSSS
TTSTTST..SSS
Template Predicted Secondary structure 


























..



Template SS confidence 















































































   99100.........110.........120.........130.........140.........150.........160.........170 ......
 
   188.190......
Predicted Secondary structure 

Query SS confidence 








Query Sequence  FIFVTHDQG
Query Conservation 

 


   
Alig confidence 








Template Conservation   
  
    
Template Sequence  VIMISNDIN
Template Known Secondary structure 
SSTT
Template Predicted Secondary structure 

Template SS confidence 








   177..180.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions