Job Description P77795 Confidence 100.00% Date Thu Jan 5 12:32:56 GMT 2012 Rank 40 Aligned Residues 224 % Identity 23% Template c2d3wB_ PDB info PDB header:biosynthetic protein Chain: B: PDB Molecule:probable atp-dependent transporter sufc; PDBTitle: crystal structure of escherichia coli sufc, an atpase2 compenent of the suf iron-sulfur cluster assembly machinery Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.				.	.	.	.	.	.
Predicted Secondary structure																																																		.	.																						.	.	.
Query SS confidence																																																		.	.																						.	.	.
Query Sequence		V	E	F	D	N	V	S	R	L	Y	G	D	V	R	A	V	D	G	V	S	I	A	I	K	D	G	E	F	F	S	M	L	G	P	S	G	S	G	K	T	T	C	L	R	L	I	A	G	.	.	F	E	Q	L	S	G	G	A	I	S	I	F	G	K	P	A	S	N	L	P	P	.	.	.	W	E	R	D	V	N
Query Conservation																																																		.	.																						.	.	.
Alig confidence																																																		.	.																						.	.	.
Template Conservation
Template Sequence		L	S	I	K	D	L	H	V	S	V	E	D	K	A	I	L	R	G	L	S	L	D	V	H	P	G	E	V	H	A	I	M	G	P	N	G	S	G	K	S	T	L	S	A	T	L	A	G	R	E	D	Y	E	V	T	G	G	T	V	E	F	K	G	K	D	L	L	A	L	S	P	E	D	R	A	G	E	G	I	F
Template Known Secondary structure											S	S	S													T	T									T	T	S											T		T	T											T	T			G	G	G	S									T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.								.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																												.	.	.	.	.	.	.																						.	.
Query SS confidence																												.	.	.	.	.	.	.																						.	.
Query Sequence		T	V	F	Q	D	Y	A	L	F	P	H	M	S	I	L	D	N	V	A	Y	G	L	M	V	K	G	.	.	.	.	.	.	.	V	N	K	K	Q	R	H	A	M	A	Q	E	A	L	E	K	V	A	L	G	F	.	.	V	H	Q	R	K	P	S	Q	L	S	G	G	Q	R	Q	R	V	A	I	A	R	A	L	V
Query Conservation																												.	.	.	.	.	.	.																						.	.
Alig confidence																												.	.	.	.	.	.	.																						.	.
Template Conservation
Template Sequence		M	A	F	Q	Y	P	V	E	I	P	G	V	S	N	Q	F	F	L	Q	T	A	L	N	A	V	R	S	Y	R	G	Q	E	T	L	D	R	F	D	F	Q	D	L	M	E	E	K	I	A	L	L	K	M	P	E	D	L	L	T	R	S	V	N	V	G	F	S	G	G	E	K	K	R	N	D	I	L	Q	M	A	V
Template Known Secondary structure											T	T																		T	T																				T	T			T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	P	R	V	L	L	L	D	E	P	L	G	A	L	D	L	K	L	R	E	Q	M	Q	L	E	L	K	K	L	Q	Q	S	L	G	I	T	F	I	F	V	T	H	D	Q	G	E	A	L	S	M	S	D	R	V	A	V	F	N	N	G	R	I	E	Q	V	D	S	P	R	D	L	Y	M	R	P	R	T	P	F
Query Conservation
Alig confidence														.																					.
Template Conservation														.																					.
Template Sequence		L	E	P	E	L	C	I	L	D	E	S	D	.	S	L	D	I	D	A	L	K	V	V	A	D	G	V	N	S	L	R	D	G	.	K	R	S	F	I	I	V	T	H	Y	R	I	L	D	Y	I	K	P	D	Y	V	H	V	L	Y	Q	G	R	I	V	K	S	G	D	F	T	L	V	K	Q	L	E	E	Q	G	Y
Template Known Secondary structure					S									.																				S	.	S	S																	S							T	T							S	T	T								T	T	G
Template Predicted Secondary structure														.																					.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions