Job Description P77795 Confidence 99.75% Date Thu Jan 5 12:32:56 GMT 2012 Rank 67 Aligned Residues 251 % Identity 12% Template c1u9iA_ PDB info PDB header:circadian clock protein Chain: A: PDB Molecule:kaic; PDBTitle: crystal structure of circadian clock protein kaic with phosphorylation2 sites Resolution 2.80 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		I	K	D	G	E	F	F	S	M	L	G	P	S	G	S	G	K	T	T	C	L	R	.	.	L	I	A	G	F	E	Q	L	S	G	G	A	I	S	I	F	G	K	P	A	S	N	L	P	P	W	E	R	D	V	N	T	V	F	Q	D	Y	A	L	F	P	H	M	S	I	L	D	N	V	A	Y	G	L	M	V	K
Query Conservation																								.	.
Alig confidence																								.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	P	I	G	R	S	T	L	V	S	G	T	S	G	T	G	K	T	L	F	S	I	Q	F	L	Y	N	G	I	I	E	F	D	E	P	G	V	F	V	T	F	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	P	Q	D	I	I	K	N	A	R	S	F
Template Known Secondary structure				T	T	S							S	T	T	S	S																									S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S										G	G	G
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.																										.	.	80	.	.	.	.	.	.	.	.	.	90
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.					.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																																																															.	.	.	.
Query SS confidence																																																															.	.	.	.
Query Sequence		G	V	N	K	K	Q	R	H	A	M	A	Q	E	A	L	E	K	V	A	L	G	F	V	H	Q	R	K	P	S	Q	L	S	G	G	Q	R	Q	R	V	A	I	A	R	A	L	V	N	E	P	R	V	L	L	L	D	E	P	L	G	A	L	.	.	.	.	D	L	K	L	R	E	Q	M	Q	L	E	L	K	K	L
Query Conservation																																																															.	.	.	.
Alig confidence																																																															.	.	.	.
Template Conservation
Template Sequence		G	W	D	L	A	K	L	V	D	E	G	K	L	F	I	L	D	A	S	P	D	P	E	G	Q	E	V	V	G	G	F	D	L	S	A	L	I	E	R	I	N	Y	A	I	Q	K	Y	R	A	R	R	V	S	I	D	S	V	T	S	V	F	Q	Q	Y	D	A	S	S	V	V	R	R	E	L	F	R	L	V	A	R
Template Known Secondary structure		T									T	T	S										S	S			S			S	S																		T		S							S	T	T	T	S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.			.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.
Query SS confidence																													.	.
Query Sequence		Q	Q	S	L	G	I	T	F	I	F	V	T	H	D	Q	G	E	A	L	S	M	S	D	R	V	A	V	.	.	F	N	N	G	R	I	E	Q	V	D	S	P	R	D	L	Y	M	R	P	R	T	P	F	V	A	G	F	V	G	T	S	N	V	F	D	G	L	M	A	E	K	L	C	G	M	T	G	S	F	A	L
Query Conservation																													.	.
Alig confidence																													.	.																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	K	Q	I	G	A	T	T	V	M	T	T	E	R	I	E	E	Y	G	P	I	A	R	Y	G	V	E	E	F	V	S	D	N	V	V	I	L	R	N	V	L	E	G	E	R	R	.	.	.	.	.	.	.	.	.	.	.	R	R	T	L	E	I	L	K	L	R	G	T	S	H	M	K	G	E	Y	P	F	T	I
Template Known Secondary structure						T										S	S	S	S	S		S	S	T	T	S							S										S	T	T			.	.	.	.	.	.	.	.	.	.	.										T	T	S					S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.												.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.					.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																															.	.	.	.
Query SS confidence																															.	.	.	.
Query Sequence		R	P	E	H	I	R	L	N	T	P	G	E	L	Q	A	N	G	T	I	Q	A	V	Q	Y	Q	G	A	A	T	.	.	.	.	R	F	E	L	K	L	N	G	G	E	K	L	L	V	S	Q	A	N	M	T	G	E	E	L	P	A
Query Conservation																															.	.	.	.
Alig confidence																															.	.	.	.
Template Conservation
Template Sequence		T	D	H	G	I	N	I	F	P	L	G	A	M	R	L	T	Q	R	S	S	N	V	R	V	S	S	G	V	V	R	L	D	E	M	C	G	G	G	F	F	K	D	S	I	I	L	A	T	G	A	T	G	T	G	K	T	L	L	V
Template Known Secondary structure			T	T							T	T	T			S												S								T	T	S	S			S	S									T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions