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Job DescriptionP77795
Confidence100.00%DateThu Jan 5 12:32:56 GMT 2012
Rank6Aligned Residues325
% Identity34%Templatec1oxtB_
PDB info PDB header:transport proteinChain: B: PDB Molecule:abc transporter, atp binding protein; PDBTitle: crystal structure of glcv, the abc-atpase of the glucose abc2 transporter from sulfolobus solfataricus
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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Query Sequence  MTYAVEFDNVSRLY. . GDVRAVDGVSIAIKDGEFFSMLGPSGSGKTTCLRLIAGFEQLSGGAISIFGKPASNLPPWERD.
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Template Sequence  MVR. IIVKNVSKVFKKGKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVPP
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.GGGT
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Query Sequence  . . . . VNTVFQDYALFPHMSILDNVAYGLMVKGVNKKQRHAMAQEALEKVALGFVHQRKPSQLSGGQRQRVAIARALVNEP
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Template Sequence  EDRKIGMVFQTWALYPNLTAFENIAFPLTNMKMSKEEIRKRVEEVAKILDIHHVLNHFPRELSGGQQQRVALARALVKDP
Template Known Secondary structure  GGS

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TTS
GGGTTSS

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Query Sequence  RVLLLDEPLGALDLKLREQMQLELKKLQQSLGITFIFVTHDQGEALSMSDRVAVFNNGRIEQVDSPRDLYMRPRTPFVAG
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Template Sequence  SLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDNPVSIQVAS
Template Known Secondary structure  SSSSSSS


S

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Query Sequence  FVGTSNVFDGLMAE. . . . . . . . . . . . KLCGMTGSFALRPEHIRLNTPGEL. . . . . . QANGTIQAVQYQGAATRFELKLNG
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Template Sequence  LIGEINELEGKVTNEGVVIGSLRFPVSVSSDRAIIGIRPEDVKLSKDVIKDDSWILVGKGKVKVIGYQGGLFRITITPLD
Template Known Secondary structure  S


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Query Sequence  GEKLLVSQANMTGEELPATLTPGQQVMVSWSRDVMVPL
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Template Sequence  SEEEIFT. . . . . . . YSDHPIHSGEEVLVYVRKDKIKVF
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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