 |
Job Description | P0AG24 | Confidence | 95.42% | Date | Thu Jan 5 11:27:55 GMT 2012 |
Rank | 52 | Aligned Residues | 113 |
% Identity | 19% | Template | d2qgsa1 |
SCOP info | HD-domain/PDEase-like
| HD-domain/PDEase-like
| HD domain
|
Resolution | 2.00 |
|
 |
  |   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | |
. | . | 60 | |
. | . | . | . | . | . | |
. | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |
|
| . |
|
|  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
| . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | I | K | R | L | R | Q | A | Y | L | V | A | R | D | A | H | E | G | Q | T | R | S | S | G | E | P | Y | I | T | H | P | V | A | V | A | C | I | L | A | . |
E | M | K | . |
L | D | Y | E | T | L | . |
M | A | A | L | L | H | D | V | I | E | D | T | P | A | T | Y | Q | D | M | E | Q | L | F | G | K | S | V | A | E |
Query Conservation |   |
  |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |
|
|   |
|   |
|
|
|
|
|
|   |
|
|
|   |
|
|   |
|
|
| . |   |   |   | . |   |
|   |   |
|
| . |   |
|
|
|
|
|
|   |
|
|
|
|   |   |
|   |   |   |
|   |   |   |
|
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
| . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
Template Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |
|
|   |   |
|
|
|
|
|
|
|
| . |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |   | . | . |
Template Sequence |   |
S | R | X | K | I | K | K | A | Y | E | Y | X | K | S | F | H | Q | H | D | T | T | G | H | D | I | A | H | V | E | R | V | Y | N | N | A | C | Y | I | A | K | R | E | N | I | T | D | T | L | V | I | E | L | S | S | L | L | H | D | T | V | . |
D | S | K | L | T | D | E | I | L | A | Y | D | Q | L | K | Q | F | . |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |
|
|  |  |  |  |  |  |  |  |  | T | T | T | T | . |
|
| S | S | S |
|  |  |  |  |  |  |  |  |  |  |  | . | . |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
. | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | |
|
  |
  |   |
96 | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | |
|
|
. | . | . | . | . | . | . | . | 140 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | V | E | G | V | S | K | L | D | K | L | K | F | R | D | K | K | E | A | Q | A | E | N | F | R | K | M | I | M | A | M | V | Q | D | I | R | . |
. |
. |
V | I | L | I | K | L | A | D | R | T | H | N | M |
Query Conservation |   |
|
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|
|
|
|
|
|   |   |   |
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . | . | . | . |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |
|
|
|   |   |
|
|   |
|
|
|
|
|
|
|
|
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | S | T | L | D | L | S | S | E | I | S | Q | Q | V | L | Y | I | I | K | H | X | S | H | V | K | L | S | I | D | G | E | I | V | R | D | A | D | R | L | D | A | I |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . | . |  |  | T | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
|
|
|
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|