 |
Job Description | P0AG24 | Confidence | 76.72% | Date | Thu Jan 5 11:27:55 GMT 2012 |
Rank | 95 | Aligned Residues | 83 |
% Identity | 27% | Template | d2paqa1 |
SCOP info | HD-domain/PDEase-like
| HD-domain/PDEase-like
| HD domain
|
Resolution | 2.10 |
|
 |
  |   |
48 | . | 50 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
60 | . | . | . | . | |
. | . | . | . | . | 70 | . | . | . | . | . | . | . | |
|
|
|
|
|
. | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . |
|
|
|  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | P | V | A | V | A | C | I | L | A | E | M | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | L | D | Y | E | . |
T | L | M | A | A | L | L | H | D | V | I | E | D | . |
. |
. |
. |
. |
. |
T | P | A | T | Y | Q | D | M | E | Q | L | F | G | K | S | V | A | E | L | V | E | G | V | S | K | L | D | K | L | K | F | R | D |
Query Conservation |   |
|
|
|   |
|
|   |
|
|
|   |   | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   | . |
|
|   |
|
|
|
|
|
|   |
|
|
| . | . | . | . | . | . |
|   |   |
|   |   |   |
|   |   |   |
|
|   |   |
|
|   |
|
|   |
|
|
|
|
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|
|   |   |
|
|   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |
|
|   |
|
|
|   |
|   |   |
|
|
|
|   |   |
|   |
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|
|   | . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
H | S | L | Q | V | A | X | V | A | H | A | L | A | A | I | K | N | R | K | F | G | G | N | V | N | A | E | R | I | A | L | L | A | X | Y | H | D | A | S | E | V | L | T | G | D | L | P | T | P | Q | E | Y | K | A | I | E | K | I | A | Q | Q | K | L | V | D | X | V | P | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |
|
|
|
|
|
|
| T |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
| G | . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  | . | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
33 | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | |
|
|
|
|
|
|
|
|
|
|
  |
  |   |
111 | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | |
130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | K | E | A | Q | A | E | N | F | R | K | M | I | M | A | M | V | Q | D | . |
I | R | V | I | L | I | K | L | A | D | R | T | H | N | M |
Query Conservation |   |
  |   |   |   |
|
|
|   |   |
|
|
|
|
|
|   |   |   |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
. | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |
|
|   |   |
|
|   |
|
|
|
|   |   |   |
Template Sequence |   |
. |
. |
. |
E | L | R | D | I | F | A | P | L | I | D | E | H | A | Y | S | D | E | E | K | S | L | V | K | Q | A | D | A | L | C | A | Y |
Template Known Secondary structure |   |
. | . | . | G | G |  |  |  |  |  |  |  |  | T | T | T | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
111 | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|