 |
Job Description | P0AG24 | Confidence | 76.63% | Date | Thu Jan 5 11:27:55 GMT 2012 |
Rank | 96 | Aligned Residues | 81 |
% Identity | 25% | Template | d2gz4a1 |
SCOP info | HD-domain/PDEase-like
| HD-domain/PDEase-like
| HD domain
|
Resolution | 1.50 |
|
 |
  |   |
48 | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | |
|
. | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | |
. | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  | . |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | P | V | A | V | A | C | I | L | A | E | M | K | L | . |
. |
D | Y | E | T | L | M | A | A | L | L | H | D | V | I | E | D | T | P | A | T | Y | . |
Q | D | M | E | Q | L | F | G | K | S | V | A | E | L | V | E | G | V | S | K | L | D | K | L | K | F | R | D | K | K | E | A | Q | A | E | N | F | R | K | M | I | M |
Query Conservation |   |
|
|
|   |
|
|   |
|
|
|   |   |   |   | . | . |
|   |   |
|
|   |
|
|
|
|
|
|   |
|
|
|
|   |   |
|   | . |   |   |
|   |   |   |
|
|   |   |
|
|   |
|
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
Template Conservation |   |
|
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |
|   |   |   |
|
|   |   |   |
|   |
|   |   |
|   |   |   |
|   |   |
|
|   |
|   |   |   |
|
|   |   |   |
|
|
|
|   |   |   |   |   |
|   |   |   | . | . | . | . |
Template Sequence |   |
H | C | L | I | V | E | T | I | F | C | R | M | C | P | G | A | T | P | D | E | M | Q | M | A | L | L | H | D | A | P | E | Y | V | I | G | D | M | I | S | P | F | K | S | V | V | G | G | G | Y | K | T | V | E | K | R | L | E | A | A | V | H | L | R | F | G | L | P | P | H | A | S | R | E | L | K | D | . |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  | T | T | T | T | T |  |  |  |  |
|
|
|
| G | G | G | G | G | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S | S |
|
|  |  |  |  |  | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
59 | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | |
|
|
|
  |
  |   |
125 | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . |
Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | M | V | Q | D | I | R | V | I | L | I | K | L | A | D | R | T |
Query Conservation |   |
|   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
. | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . | . | . |   |
|
|   |
|
|   |
|
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | I | K | K | A | D | T | V |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
|
|
135 | . | . | . | . | 140 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|