 |
Job Description | P0AG24 | Confidence | 21.56% | Date | Thu Jan 5 11:27:55 GMT 2012 |
Rank | 230 | Aligned Residues | 49 |
% Identity | 18% | Template | d1rypd_ |
SCOP info | Ntn hydrolase-like
| N-terminal nucleophile aminohydrolases (Ntn hydrolases)
| Proteasome subunits
|
Resolution | 1.90 |
|
  |   |
384 | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | |
. | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |
|  |  |  |  |  |  |  | . |
|
|  |  |
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | P | D | E | I | Y | V | F | T | P | E | G | R | I | V | E | L | P | A | G | A | T | P | V | D | F | A | Y | A | V | H | T | D | I | G | H | A | C | V | G | A | R | V | . |
D | R | Q | P | Y | P | L | S | Q | P | L | T | S | G |
Query Conservation |   |
  |   |   |   |
|   |
|
|
|
|
|
|   |
|
|   |
|
|   |
|
|
|   |
|
|
|
|
|   |
|
|
|   |
|
|   |   |
|   |
|
|
|
| . |
|
|   |   |
|
|
|   |   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |
|
|
|   |
|   |
|   |
|   |
|
|
|   |   |
|   |   | . | . | . | . | . | . | . | . |   |
|   |
|
|
|
|
|   |   |   |
|
|
|
|
|
|
|
|   |
|   |   |   |
|
Template Sequence |   |
Y | D | R | A | L | S | I | F | S | P | D | G | H | I | F | Q | V | E | Y | A | L | E | A | V | K | . |
. |
. |
. |
. |
. |
. |
. |
R | G | T | C | A | V | G | V | K | G | K | N | C | V | V | L | G | C | E | R | R | S | T | L | K |
Template Known Secondary structure |   |
|
|
|
|
| S |
|
| B | T | T | T | B |
|  |  |  |  |  |  |  |  |  |  | T | . | . | . | . | . | . | . | . | T | S |
|
|  |  |  |  |  |
| S | S |
|  |  |  |  |  |  |
|
|
| S | S |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|