Job Description P0AG24 Confidence 27.75% Date Thu Jan 5 11:27:55 GMT 2012 Rank 207 Aligned Residues 169 % Identity 15% Template c3memA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:putative signal transduction protein; PDBTitle: crystal structure of a putative signal transduction protein2 (maqu_0641) from marinobacter aquaeolei vt8 at 2.25 a resolution Resolution 2.25 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60									.	.	.	.	.		.	.	.	.	70	.	.	.
Predicted Secondary structure																																									.																			.	.	.	.	.	.	.	.						.
Query SS confidence																																									.																			.	.	.	.	.	.	.	.						.
Query Sequence		F	E	S	L	N	Q	L	I	Q	T	Y	L	P	E	D	Q	I	K	R	L	R	Q	A	Y	L	V	A	R	D	A	H	E	G	Q	T	R	S	S	G	.	E	P	Y	I	T	H	P	V	A	V	A	C	I	L	A	E	M	K	.	.	.	.	.	.	.	.	L	D	Y	E	T	.	L	M	A	A	L	L	H	D
Query Conservation																																									.																			.	.	.	.	.	.	.	.						.
Alig confidence																																									.																			.	.	.	.	.	.	.	.						.
Template Conservation
Template Sequence		V	H	S	V	H	D	A	V	S	R	V	L	G	F	D	L	V	X	N	L	A	X	G	L	A	L	G	R	A	L	K	H	P	Q	D	H	P	D	G	Y	V	D	Y	W	Q	Q	A	I	W	Q	A	Q	S	A	G	I	L	A	S	X	X	P	R	G	Q	R	P	L	F	G	L	A	Y	L	A	G	L	L	H	N
Template Known Secondary structure											T	T	T																T	T	S				S				T	T	S																					S		G	G	G														T	T
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		74	.																					.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.																																														.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.																																														.
Query Sequence		V	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	T	P	A	T	Y	Q	D	M	E	.	Q	L	F	G	K	S	V	A	E	L	V	E	G	V	S	K	L	D	K	L	K	F	R	D	K	K	E	A	Q	A	E	N	F	R	K	M	I	M	A	M	V	Q	D	I	R	.
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.																																														.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.																					.	.	.																							.
Template Conservation																																																								.	.	.
Template Sequence		F	G	H	L	V	L	A	Q	V	F	P	P	H	F	K	L	V	C	R	S	L	E	V	S	P	H	I	D	S	S	V	I	E	H	Y	L	L	G	I	T	R	E	Q	I	A	A	Q	L	X	E	N	W	G	X	.	.	.	P	D	E	V	T	L	A	I	R	Y	Q	K	N	P	A	Y	D	G	P	H	N	V	Y
Template Known Secondary structure		T									S															T	T	S											S	S													T	T		.	.	.											T	T		T	T			S	T	T
Template Predicted Secondary structure																																																								.	.	.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.				370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.			.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																																														.	.
Query SS confidence																																														.	.
Query Sequence		V	I	L	I	K	L	A	D	R	T	H	N	M	R	T	L	G	S	L	R	P	D	K	R	R	R	I	A	R	E	T	L	E	I	Y	S	P	L	A	H	R	L	G	I	.	.	H	H	I	K	T	E	L	E	E	L
Query Conservation																																														.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.
Template Sequence		A	R	L	L	W	L	G	R	Q	L	L	T	E	R	G	V	A	L	G	A	G	E	.	.	.	.	.	.	.	.	.	.	S	A	T	Q	A	V	Y	D	E	L	G	L	D	R	E	L	V	Q	E	Q	F	D	E	L
Template Known Secondary structure															T	T		S	S	S				.	.	.	.	.	.	.	.	.	.										T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.											.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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