Job Description P0AG24 Confidence 47.44% Date Thu Jan 5 11:27:55 GMT 2012 Rank 159 Aligned Residues 193 % Identity 20% Template c3hc1A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized hdod domain protein; PDBTitle: crystal structure of hdod domain protein with unknown function2 (np_953345.1) from geobacter sulfurreducens at 1.90 a resolution Resolution 1.90 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.					.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.								.	.														.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.								.	.														.	.	.	.	.	.
Query Sequence		N	Q	L	I	Q	T	Y	L	P	E	D	Q	I	K	R	L	R	Q	A	Y	L	V	A	R	D	A	H	E	G	Q	T	R	S	S	G	E	P	Y	I	T	H	P	V	A	V	A	C	I	.	.	.	.	L	A	E	M	K	L	D	.	.	Y	E	T	L	M	A	A	L	L	H	D	V	I	.	.	.	.	.	.
Query Conservation																																																		.	.	.	.								.	.														.	.	.	.	.	.
Alig confidence																																																		.	.	.	.								.	.														.	.	.	.	.	.
Template Conservation
Template Sequence		I	R	D	A	V	I	Y	L	G	L	D	L	L	R	E	A	I	F	T	C	A	I	V	D	L	F	K	T	G	K	G	P	L	N	R	S	T	L	W	A	H	S	L	G	V	A	R	I	A	K	L	I	A	E	R	T	G	F	L	N	P	V	N	V	Y	V	A	G	L	L	H	D	V	G	E	V	F	I	N	F
Template Known Secondary structure																													S				S	S																							T	T		S											T	T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
															76	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.												.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.												.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	T	P	A	T	Y	Q	D	M	E	.	Q	L	F	G	K	S	V	A	E	L	V	E	G	V	S	K	L	D	K	L	K	F	R	D	K	K	E	A	Q	A	E	N	F	R	K	M	I	M	A	M	V	Q	D	I	R	V	I	L	I	K	L	A	D	R	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.												.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.												.																						.
Template Conservation																																																.
Template Sequence		F	R	G	K	E	F	S	Q	V	V	T	L	V	D	E	E	K	I	T	F	G	Q	A	E	E	R	L	F	G	T	S	H	C	E	V	G	F	A	L	A	K	R	W	S	L	N	.	E	F	I	C	D	T	I	L	Y	H	H	D	I	E	A	V	P	Y	K	Q	A	A	I	V	A	X	V	A	F	A	D	E	Y
Template Known Secondary structure			S																											S	S													T	T			.										T	T		G	G	G		S	S	S
Template Predicted Secondary structure																																																.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		142	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		H	N	M	R	T	.	.	L	G	S	L	R	P	D	K	R	R	R	I	A	R	E	T	L	E	I	Y	S	P	L	A	H	R	L	G	I	H	H	I	K	T	E	L	E	E	L	G	F	E	A	L	Y	P	N	R	Y	R	V	I	K	E	V	V	K	A	A	R	G	N	R	K	E	M	I	Q	K	I
Query Conservation							.	.
Alig confidence							.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	T	L	R	R	L	G	F	E	G	H	K	P	V	D	S	V	R	T	L	L	E	N	H	P	S	W	G	V	I	R	R	S	L	G	G	S	D	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	K	L	I	V	A	E	L	D	S	S	I	V	E	I	R	A	A	V	D	E	L
Template Known Secondary structure					T	T	S			S						S										T									S	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.																.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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