 |
Job Description | P0AG24 | Confidence | 97.29% | Date | Thu Jan 5 11:27:55 GMT 2012 |
Rank | 35 | Aligned Residues | 78 |
% Identity | 15% | Template | c2nyiB_ |
PDB info |
PDB header:structural genomics, unknown function | Chain: B: PDB Molecule:unknown protein; |
PDBTitle: crystal structure of an unknown protein from galdieria2 sulphuraria
|
Resolution | 1.80 Å |
|
 |
  |   |
613 | . | . | . | . | |
. | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
| . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | A | V | E | W | . |
D | K | E | T | A | Q | E | F | I | T | E | I | K | V | E | M | F | N | H | Q | G | A | L | A | N | L | T | A | A | I | N | T | T | T | S | N | I | Q | S | L | N | T | E | E | K | . |
. |
. |
. |
. |
D | G | R | V | Y | S | A | F | I | R | L | T | A | R | D | R | V | H | L | A | N | I | M | R |
Query Conservation |   |
|   |
|   |
| . |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|
|   |
|
|
|   |
|
|   |   |   |
|   |   |   |   |   |
|
|   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|
|
|
|
|
|   |   |
|
|   |   |
|
|   |   |
|
|
|
|   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |   | . |   |   |
|   |   |
Template Sequence |   |
I | S | T | R | R | A | S | H | V | S | P | D | T | R | E | Y | E | L | Y | V | E | G | P | D | S | E | G | I | V | E | A | V | T | A | V | L | A | K | K | G | A | N | I | V | E | L | E | T | E | T | L | P | A | P | F | A | G | F | T | L | F | R | X | G | S | R | V | A | F | P | F | P | L | Y | . |
Q | E | V | V | T |
Template Known Secondary structure |   |
 |  |  |  |  |
|
|
|
|
| T | T |  |  |  |  |  |  |  |  |  |  |  |
|
| T | T |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  |
| S | S | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  | G | G | G |  | . |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  | . |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | |
. | . | 150 | . | . |
  |
  |   |
687 | . | . | 690 | . |
Predicted Secondary structure |   |
 |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
Query Sequence |   |
K | I | R | V | M |
Query Conservation |   |
  |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
Template Sequence |   |
A | L | S | R | V |
Template Known Secondary structure |   |
 |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
  |   |
158 | . | 160 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|