 |
| Job Description | P0AG24 | | Confidence | 30.60% | Date | Thu Jan 5 11:27:55 GMT 2012 |
| Rank | 193 | Aligned Residues | 68 |
| % Identity | 24% | Template | c2kgrA_ |
| PDB info |
PDB header:protein binding | Chain: A: PDB Molecule:intersectin-1; |
PDBTitle: solution structure of protein itsn1 from homo sapiens.2 northeast structural genomics consortium target hr5524a
|
| Resolution | UNK |
|
| | |
453 | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 520 | . | . | . | . | . | . | . |
| Predicted Secondary structure | |
|
|  | | | | | | |
|
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
|
|
|
|
|
|
|
| | | | | | | | | | |
|
|
|
| . | . | . | . | . |
| | | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
| Query Sequence | |
P | N | A | A | W | L | N | F | V | V | S | S | K | A | R | A | K | I | R | Q | L | L | K | N | L | K | R | D | D | S | V | S | L | G | R | R | L | L | N | H | A | L | G | G | S | R | K | L | N | E | I | P | Q | E | N | I | Q | R | E | L | D | R | M | K | L | A | . |
. |
. |
. |
. |
T | L | D | D | L | L | A | E | I |
| Query Conservation | |
| | |
|
|
| | |
| |
| |
|
|
| |
|
|
| | |
|
| | | | | | | |
| | |
|
| | |
| | |
|
| | | | | | | | | | | | | | | | | | | | | | | | | . | . | . | . | . | | |
|
|
| | | |
|
| Alig confidence | |
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| | | | | | . | . | . |
|
| |
|
| | | |
| | | |
| | | |
| |
| | |
| |
| | | |
| | | | |
| | | | . | . | . | . | |
| | | | |
| | |
| | | | |
| | | | |
| |
| | | |
|
| | |
|
|
| Template Sequence | |
P | V | A | E | W | A | . |
. |
. |
V | P | Q | S | S | R | L | K | Y | R | Q | L | F | N | S | H | D | K | T | M | S | G | H | L | T | G | P | Q | A | R | T | I | L | M | Q | S | . |
. |
. |
. |
S | L | P | Q | A | Q | L | A | S | I | W | N | L | S | D | I | D | Q | D | G | K | L | T | A | E | E | F | I | L | A | M |
| Template Known Secondary structure | |
| S |
|
| S | S | . | . | . | S |
| | | | | | | | | | | | | T | T | S |
| S | S |
|
|  | |  | | | | | | | | | | T | T | . | . | . | . |
|
|
| | | | | | | | | | | |
| S | S |
|
| S | | | | | | | | | | | |
| Template Predicted Secondary structure | |
|
|
|
|
|
| . | . | . |
|
| | | | | | | | | | | | | | |
|
|
|
|
|
|
| | | | | | | | | | | | |
| . | . | . | . |
|
|
| | | | | | | | | | | |
|
|
|
|
|
| | |
| | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
2 | . | . | . | . | . | |
|
|
. | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | |
|
|
|
. | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
