Job Description P0AG24 Confidence 22.89% Date Thu Jan 5 11:27:55 GMT 2012 Rank 223 Aligned Residues 162 % Identity 19% Template c1wy0A_ PDB info PDB header:transferase Chain: A: PDB Molecule:geranylgeranyl pyrophosphate synthetase; PDBTitle: crystal structure of geranylgeranyl pyrophosphate synthetase from2 pyrococcus horikoshii ot3 Resolution 2.20 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.											.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		F	E	S	L	N	Q	L	I	Q	T	Y	L	P	E	D	Q	I	K	R	L	R	Q	A	Y	L	V	A	R	D	A	H	E	G	Q	T	R	S	S	.	.	.	.	.	.	.	.	.	.	G	E	P	Y	I	T	H	P	V	A	V	A	C	I	L	A	E	M	K	L	D	Y	E	T	L	M	A	A	L	L	H	D
Query Conservation																																								.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.
Template Sequence		A	K	L	I	D	E	K	I	F	E	L	I	P	E	K	D	P	R	V	L	Y	E	A	A	R	H	Y	P	L	A	G	G	K	R	V	R	P	F	V	V	L	T	S	T	E	A	V	G	G	D	P	L	R	A	I	Y	P	A	V	A	I	E	L	I	H	.	.	.	.	.	.	.	.	N	Y	S	L	V	H	D
Template Known Secondary structure													S		S		S	S										T	G	G	G	T													T	T	T	T	T	S		G	G	G	G												.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.									80	.	.	.	.	.	.
		74	.	.	.	.	.	80	.				.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure										.	.	.
Query SS confidence										.	.	.
Query Sequence		V	I	E	D	T	P	A	T	.	.	.	Y	Q	D	M	E	Q	L	F	G	K	S	V	A	E	L	V	E	G	V	S	K	L	D	K	L	K	F	R	D	K	K	E	A	Q	A	E	N	F	R	K	M	I	M	A	M	V	Q	D	I	R	V	I	L	I	K	L	A	D	R	T	H	N	M	R	T	L	G	S	L
Query Conservation										.	.	.
Alig confidence										.	.	.
Template Conservation
Template Sequence		D	I	M	D	M	D	E	T	R	R	G	K	P	T	V	H	R	I	W	G	V	N	M	A	I	L	A	G	D	L	L	F	S	K	A	F	E	A	V	A	R	A	E	I	P	P	E	K	K	A	R	V	L	E	V	I	V	K	A	S	N	E	L	C	E	G	Q	A	R	D	L	E	F	E	K	K	S	T	V	T
Template Known Secondary structure						T				S	T	T	S																													T			S																														T	T		S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	D	K	R	R	R	I	A	R	E	T	L	E	I	Y	S	P	L	A	H	R	L	G
Query Conservation
Alig confidence																			.
Template Conservation																			.
Template Sequence		I	E	E	Y	M	E	M	I	S	G	K	T	G	A	L	F	E	.	A	S	A	K	V	G
Template Known Secondary structure													T						.
Template Predicted Secondary structure																			.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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