Job Description P0AG24 Confidence 100.00% Date Thu Jan 5 11:27:55 GMT 2012 Rank 1 Aligned Residues 302 % Identity 50% Template c1vj7B_ PDB info PDB header:hydrolase, transferase Chain: B: PDB Molecule:bifunctional rela/spot; PDBTitle: crystal structure of the bifunctional catalytic fragment of relseq,2 the rela/spot homolog from streptococcus equisimilis. Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	F	E	S	L	N	Q	L	I	Q	T	Y	L	P	E	D	Q	I	K	R	L	R	Q	A	Y	L	V	A	R	D	A	H	E	G	Q	T	R	S	S	G	E	P	Y	I	T	H	P	V	A	V	A	C	I	L	A	E	M	K	L	D	Y	E	T	L	M	A	A	L	L	H	D	V	I	E	D	T	P	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	G	E	E	V	V	A	L	A	A	K	Y	M	N	E	T	D	A	A	F	V	K	K	A	L	D	Y	A	T	A	A	H	F	Y	Q	V	R	K	S	G	E	P	Y	I	V	H	P	I	Q	V	A	G	I	L	A	D	L	H	L	D	A	V	T	V	A	C	G	F	L	H	D	V	V	E	D	T	D	I	T
Template Known Secondary structure															S																			T	T	T		B		T	T	S	S	B	T	T													T	T			S									T	T					S	S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	D	M	E	Q	L	F	G	K	S	V	A	E	L	V	E	G	V	S	K	L	D	K	L	K	F	R	D	K	K	E	A	Q	A	E	N	F	R	K	M	I	M	A	M	V	Q	D	I	R	V	I	L	I	K	L	A	D	R	T	H	N	M	R	T	L	G	S	L	R	P	D	K	R	R	R	I	A	R	E
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	N	I	E	F	D	F	G	K	D	V	R	D	I	V	D	G	V	T	K	L	G	K	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	S	K	D	I	R	V	I	L	V	K	L	A	D	R	L	H	N	M	R	T	L	K	H	L	R	K	D	K	Q	E	R	I	S	R	E
Template Known Secondary structure																								T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					T	G	G	G	S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.																				.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	E	I	Y	S	P	L	A	H	R	L	G	I	H	H	I	K	T	E	L	E	E	L	G	F	E	A	L	Y	P	N	R	Y	R	V	I	K	E	V	V	K	A	A	R	G	N	R	K	E	M	I	Q	K	I	L	S	E	I	E	G	R	L	Q	E	A	G	I	P	C	R	V	S	G	R	E	K	H	L	Y
Query Conservation
Alig confidence																																											.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.
Template Sequence		T	M	E	I	Y	A	P	L	A	H	R	L	G	I	S	R	I	K	W	E	L	E	D	L	A	F	R	Y	L	N	E	T	E	F	Y	K	I	S	H	M	M	.	.	.	.	.	.	N	E	K	L	V	D	D	I	V	T	K	I	K	S	Y	T	T	E	Q	G	L	F	G	D	V	Y	G	R	P	K	H	I	Y
Template Known Secondary structure					T								T	T																													.	.	.	.	.	.	T																			T
Template Predicted Secondary structure																																											.	.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.							.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	Y	C	K	M	V	L	K	E	Q	R	F	H	S	I	M	D	I	Y	A	F	R	V	I	V	N	D	S	D	T	C	Y	R	V	L	G	Q	M	H	S	L	Y	K	P	R	P	G	R	V	K	D	Y	I	A	I	P	K	A	N	G	Y	Q	S	L	H	T	S	M	I	G	P	H	G	V	P	V	E	V	Q
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.																																																													.
Template Conservation								.	.	.	.	.	.	.	.																																																													.
Template Sequence		S	I	Y	R	K	M	.	.	.	.	.	.	.	.	R	I	F	D	L	I	A	I	R	C	V	M	E	T	Q	S	D	V	Y	A	M	V	G	Y	I	H	E	L	W	R	P	M	P	G	R	F	K	D	Y	I	A	A	P	K	A	N	G	Y	Q	S	I	H	T	T	V	Y	G	P	K	G	.	P	I	E	I	Q
Template Known Secondary structure						T	T	.	.	.	.	.	.	.	.													S	S															S		B		T	T					T	T	T	S			T	T												S	S	S	.
Template Predicted Secondary structure								.	.	.	.	.	.	.	.																																																													.
Template SS confidence
		247	.	.	250	.	.									.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.		.	.	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	T	E	D	M	D	Q	M	A	E	M	G	V	A	A	H	W
Query Conservation
Alig confidence																	.	.
Template Conservation																	.	.
Template Sequence		I	R	T	K	E	M	H	Q	V	A	E	Y	G	V	A	.	.	W
Template Known Secondary structure														T	T		.	.
Template Predicted Secondary structure																	.	.
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340			.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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