Job Description Q9JMS8 Confidence 98.54% Date Thu Jan 5 12:38:04 GMT 2012 Rank 9 Aligned Residues 58 % Identity 14% Template d1hyva_ SCOP info Ribonuclease H-like motif Ribonuclease H-like Retroviral integrase, catalytic domain Resolution 1.70

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		L	H	S	D	Q	G	V	Q	Y	K	S	N	K	Y	K	I	L	L	C	R	Y	E	A	M	Q	S	M	S	R	R	G	N	Y	L	D	N	S	P	M	G	R	V	F	R	R	F	K	S	K	W	L	A	K	G	.	G	Y	G	D	F	S	H	A	V	R	D	I
Query Conservation																																																								.
Alig confidence																	.	.	.	.	.	.	.	.																																.
Template Conservation																	.	.	.	.	.	.	.	.
Template Sequence		V	H	T	D	N	G	S	N	F	T	S	T	T	V	K	.	.	.	.	.	.	.	.	A	A	W	W	A	G	I	K	Q	E	F	G	Q	G	V	I	E	S	M	N	K	E	L	K	K	I	I	G	Q	V	R	D	Q	A	E	H	L	K	T	A	V	Q	M	A
Template Known Secondary structure					S		G	G	G	G		S					.	.	.	.	.	.	.	.				T	T																										G	G	G	S	S	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.									.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions