Job Description Q9JMS8 Confidence 98.31% Date Thu Jan 5 12:38:04 GMT 2012 Rank 12 Aligned Residues 68 % Identity 13% Template d1bcoa2 SCOP info Ribonuclease H-like motif Ribonuclease H-like mu transposase, core domain Resolution 2.40

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.				.	40	.	.	.	.	.	.	.	.	.	50	.	.															.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																																							.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	H	S	D	Q	G	V	Q	Y	K	S	N	K	Y	K	I	L	L	C	R	Y	E	A	M	Q	S	M	S	R	R	G	N	Y	L	D	N	S	.	.	.	P	M	G	R	V	F	R	R	F	K	S	K	W	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	G	G	Y	G	D	F	S	H	A	V
Query Conservation																																							.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	P	N	R	Y	R	F	K	V	K	E	D	D	P	K	G	L	F	L	L	M	G	A	K	M	H	W	T	S	V	V	A	G	K	G	W	G	Q	A	K	P	V	E	R	A	F	G	V	G	G	L	E	E	Y	V	D	K	H	P	A	L	A	G	A	Y	T	G	P	Y	G	D	R	A	V	D	A	E	L	F	L
Template Known Secondary structure			T	T	T	T	S	S															T						S	S	S		T	T						S	S		S	S	G	G	G	S	G	G	G	G	G	G	T	T	T	T		G	G	G	T	T	T	B					T	T	T
Template Predicted Secondary structure
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
		65	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	I	K	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	T	L	A	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		438	.	440	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions