Job Description Q9JMS8 Confidence 98.61% Date Thu Jan 5 12:38:04 GMT 2012 Rank 8 Aligned Residues 57 % Identity 14% Template c1k6yB_ PDB info PDB header:transferase Chain: B: PDB Molecule:integrase; PDBTitle: crystal structure of a two-domain fragment of hiv-1 integrase Resolution 2.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		L	H	S	D	Q	G	V	Q	Y	K	S	N	K	Y	K	I	L	L	C	R	Y	E	A	M	Q	S	M	S	R	R	G	N	Y	L	D	N	S	P	M	G	R	V	F	R	R	F	K	S	K	W	L	A	K	.	G	G	Y	G	D	F	S	H	A	V	R	D	I
Query Conservation																																																							.
Alig confidence																									.	.	.	.	.	.	.	.	.																						.
Template Conservation																									.	.	.	.	.	.	.	.	.
Template Sequence		V	H	T	D	N	G	S	N	F	T	S	T	T	V	K	A	A	C	D	W	A	G	I	.	.	.	.	.	.	.	.	.	K	Q	E	D	G	V	I	E	S	M	N	K	E	L	K	K	I	I	G	Q	V	R	D	Q	A	E	H	L	K	T	A	V	Q	M	A
Template Known Secondary structure												S										T	T		.	.	.	.	.	.	.	.	.																						G	G	G		S	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.										.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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