 |
| Job Description | Q9JMS8 | | Confidence | 4.72% | Date | Thu Jan 5 12:38:04 GMT 2012 |
| Rank | 36 | Aligned Residues | 12 |
| % Identity | 8% | Template | c1bmxA_ |
| PDB info |
PDB header:viral protein | Chain: A: PDB Molecule:human immunodeficiency virus type 1 capsid; |
PDBTitle: hiv-1 capsid protein major homology region peptide analog,2 nmr, 8 structures
|
| Resolution | UNK |
|
| | |
39 | 40 | . | . | . | . | . | . | . | . | . | 50 |
| Predicted Secondary structure | |
|  | | | | | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
P | M | G | R | V | F | R | R | F | K | S | K |
| Query Conservation | |
| |
|
|
| | | |
|
| |
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
|
|
|
|
| |
|
|
|
|
| Template Sequence | |
Y | V | D | R | F | Y | K | T | L | R | A | E |
| Template Known Secondary structure | |
| | | | | | | | | | | |
| Template Predicted Secondary structure | |
| | | | | | | | | | |
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
| | |
17 | . | . | 20 | . | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
