Return to main results Retrieve Phyre Job Id

Job DescriptionP21829
Confidence100.00%DateThu Jan 5 11:38:33 GMT 2012
Rank12Aligned Residues264
% Identity19%Templated2b30a1
SCOP infoHAD-like HAD-like Predicted hydrolases Cof
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1. .......10..... ....20.........30.........40.........50......... 60.........70
Predicted Secondary structure 

...






.













......





Query SS confidence 

. . .












.











































. . . . . .










Query Sequence  MT. . . TRVIALDLDGTLL. TPKKTLLPSSIEALARAREAGYQLIIVTGRHHVAIHPFYQALAL. . . . . . DTPAICCNGTY
Query Conservation 
 ... 


  
 



 .     
      

  
   
  
 
 


           
  ......        
  
Alig confidence 

...












.











































......










Template Conservation 
    



  
 



       
       
  
   
  
   


             
              
  
Template Sequence  LKGADIKLLLIDFDGTLFVDKDIKVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGTI
Template Known Secondary structure  TTT



TBTTTB

TTT
S
T

SS

T

S
SGGGT
Template Predicted Secondary structure 




































Template SS confidence 















































































   22.......30.........40.........50.........60.........70.........80.........90.........100.
 
   71........80.........90.........100.........110.........120.........130.........140.........150
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  LYDYHAKTVLEADPMPVIKALQLIEMLNEHHIHGLMYVDDAMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLAETAQ
Query Conservation                                                                                  
Alig confidence 







































































.......
Template Conservation               
                                                          ....... 
Template Sequence  VYDQIGYTLLDETIETDVYAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRHNEM. . . . . . . L
Template Known Secondary structure 
TT





TT
GGGTTTT
TTTTS




.......T
Template Predicted Secondary structure 






























.......
Template SS confidence 















































































   102.......110.........120.........130.........140.........150.........160.........170... .
 
   151........160.........170........ .180.........190.........200.........210.........220.........
Predicted Secondary structure 










.


















Query SS confidence 



























.


















































Query Sequence  QVNAVWKFALTHDDLPQLQHFGKHVEHE. LGLECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENVVAFGDNFNDIS
Query Conservation                          
   .              
      
            
    
  


  

  
Alig confidence 



























.


















































Template Conservation                                                    
            
    
   

  

  
Template Sequence  KYRTMNKLMIVLDPSESKTVIGNLKQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIA
Template Known Secondary structure  T



S


TTTSTTT
TTS
TT

TT

GGG
SGGG
Template Predicted Secondary structure 


























Template SS confidence 















































































   175....180.........190.........200.........210.........220.........230.........240.........250....
 
   230.........240.........250...... ...260.........270.
Predicted Secondary structure 










.





Query SS confidence 


























.














Query Sequence  MLEAAGTGVAMGNADDAVKARANIVIG. DNTTDSIAQFIYSHL
Query Conservation 

  
   

  

    
  
  
  .     

   
   
Alig confidence 


























.














Template Conservation 

  
   


 

    
  
  
         
   
    
Template Sequence  MLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLKKVF
Template Known Secondary structure  S
S
TT

SS
SS
TTTT
Template Predicted Secondary structure 
















Template SS confidence 










































   255....260.........270.........280.........290.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions