Return to main results Retrieve Phyre Job Id

Job DescriptionP21829
Confidence100.00%DateThu Jan 5 11:38:33 GMT 2012
Rank9Aligned Residues263
% Identity22%Templated1nf2a_
SCOP infoHAD-like HAD-like Predicted hydrolases Cof
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  MTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVL
Query Conservation 
  


  
 



      
      

  
   
  
 
 


           
          
            
Alig confidence 

.






























.












































Template Conservation 

.


  





      
       
  
  .   
 
 


                   
   
  
        
Template Sequence  MY. RVFVFDLDGTLLNDNLEISEKDRRNIEKLSR. KCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEEGVI
Template Known Secondary structure 
B.





S
TTS


TT.TS
SS
SSS


GGGTTTT
Template Predicted Secondary structure 
.












.














Template SS confidence 















































































   1. .......10.........20.........30... ......40.........50.........60.........70........
 
   81........90.........100.........110.........120.........130.........140.........150.........160
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  EADPMPVIKALQLIEMLNEHHIHGLMYVDDAMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFAL
Query Conservation                                                                                  
Alig confidence 












































.......



























Template Conservation      
                                        .......                            
Template Sequence  LNEKIPPEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYA. . . . . . . RHSNVDYRVEPNLSELVSKMGTTKLLLI
Template Known Secondary structure 

B
GGG



SS
SS

.......TT


TT
BS
Template Predicted Secondary structure 
















.......













Template SS confidence 















































































   7980.........90.........100.........110.........120... ......130.........140.........150.
 
   161........170.........180.........190.........200.........210.........220.........230.........240
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  THDDLPQLQHFGKHVEHELGLECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENVVAFGDNFNDISMLEAAGTGVAM
Query Conservation                
                 
      
            
    
  


  

  

  
   

 
Alig confidence 















































































Template Conservation                                         
  

  
     
    

  

  

  

  
   


Template Sequence  DTPERLDELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAM
Template Known Secondary structure 

TTTSTT
TT

T

GGG
STT
S
Template Predicted Secondary structure 

























Template SS confidence 















































































   152.......160.........170.........180.........190.........200.........210.........220.........230.
 
   241........250.........260.........270..
Predicted Secondary structure 













Query SS confidence 































Query Sequence  GNADDAVKARANIVIGDNTTDSIAQFIYSHLI
Query Conservation   

    
  
  
       

   
   
 
Alig confidence 































Template Conservation   

   

  
  
       

   
  

 
Template Sequence  ENAIEKVKEASDIVTLTNNDSGVSYVLERIST
Template Known Secondary structure  TTS

S


TTTTTTS
B
Template Predicted Secondary structure 











Template SS confidence 































   232.......240.........250.........260...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions