Job Description P21829 Confidence 99.75% Date Thu Jan 5 11:38:33 GMT 2012 Rank 47 Aligned Residues 228 % Identity 18% Template c3rfuC_ PDB info PDB header:hydrolase, membrane protein Chain: C: PDB Molecule:copper efflux atpase; PDBTitle: crystal structure of a copper-transporting pib-type atpase Resolution 3.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.										.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.														.																																.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.														.																																.	.	.	.	.
Query Sequence		T	T	R	V	I	A	L	D	L	D	G	T	L	L	T	P	K	K	T	L	L	.	.	.	.	.	.	.	.	.	P	S	S	I	E	A	L	A	R	A	R	E	A	.	G	Y	Q	L	I	I	V	T	G	R	H	H	V	A	I	H	P	F	Y	Q	A	L	A	L	D	T	P	A	I	C	C	.	.	.	.	.
Query Conservation																							.	.	.	.	.	.	.	.	.														.																																.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.														.						.	.	.	.	.	.	.																				.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.
Template Sequence		K	V	N	T	L	V	V	D	K	T	G	T	L	T	E	G	H	P	K	L	T	R	I	V	T	D	D	F	V	E	D	N	A	L	A	L	A	A	A	L	E	H	Q	S	E	H	P	L	A	.	.	.	.	.	.	.	N	A	I	V	H	A	A	K	E	K	G	L	S	L	G	S	V	E	A	F	E	A	P	T
Template Known Secondary structure		S									B	T	T	T	B		S	S									S	S	S															S	S						.	.	.	.	.	.	.									T	T								S						T
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.
Template SS confidence
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.								.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.
										67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	N	G	T	Y	L	Y	D	Y	H	A	K	T	V	L	E	A	D	P	M	P	V	I	K	A	L	Q	L	I	E	M	L	N	E	H	H	I	H	G	L	M	Y	V	D	D	A	M	V	Y	E	H	P	T	G	H	V	I	R	T	S	N	W	A	Q	T	L	P	P	E	Q	R	P	T
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.
Template Sequence		G	K	G	V	V	G	Q	V	D	G	H	H	V	A	I	G	N	A	R	L	M	Q	E	H	G	G	D	N	A	P	L	F	E	K	A	D	E	L	R	G	K	G	A	S	V	M	F	M	A	V	D	G	K	.	.	.	.	.	.	.	.	.	T	V	A	L	L	V	V	E	D	P	I	K	S	S	T	P	E	T
Template Known Secondary structure		T	T						S	S	S	S						S																								T	T									T	T		.	.	.	.	.	.	.	.	.											B		S	S
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.
Template SS confidence
		492	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.										.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	Q	V	A	S	L	A	E	T	A	Q	Q	V	N	A	V	W	K	F	A	L	T	H	D	D	L	P	Q	L	Q	H	F	G	K	H	V	E	H	E	L	G	L	E	C	E	W	S	W	H	D	Q	V	D	I	A	R	G	G	N	S	K	G	K	R	L	T	K	W	V	E	A	Q	G	W	S	M	E	N	V
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Template Sequence		I	L	E	L	.	.	.	.	.	.	.	.	Q	Q	S	G	I	E	I	V	M	L	T	G	D	S	K	R	T	A	E	A	V	A	G	T	L	G	I	.	.	.	.	.	.	.	.	.	K	K	V	V	A	E	I	M	P	E	D	K	.	.	.	.	.	.	S	R	I	V	S	E	L	K	D	K	G	L	I	V
Template Known Secondary structure						.	.	.	.	.	.	.	.				T								S	S													T		.	.	.	.	.	.	.	.	.						S							.	.	.	.	.	.											S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.													.	.	.	.	.	.
Template SS confidence
		563	.	.	.									.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.										.	.	.	.	.	.	600	.	.	.	.	.							.	.	.	.	610	.	.	.	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	F	G	D	N	F	N	D	I	S	M	L	E	A	A	G	T	G	V	A	M	G	N	A	D	D	A	V	K	A	R	A	N	I	V	I	G	D	N	T	T	D	S	I	A	Q	F	I	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	M	A	G	D	G	V	N	D	A	P	A	L	A	K	A	D	I	G	I	A	M	G	T	G	T	D	V	A	I	E	S	A	G	V	T	L	L	H	G	D	L	R	G	I	A	K	A	R	R
Template Known Secondary structure							S	S	T	T							S	S						S	S	S		S							S					S			S	T	T
Template Predicted Secondary structure
Template SS confidence
		620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions