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Job DescriptionP21829
Confidence100.00%DateThu Jan 5 11:38:33 GMT 2012
Rank6Aligned Residues251
% Identity24%Templatec3pgvB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:haloacid dehalogenase-like hydrolase; PDBTitle: crystal structure of a haloacid dehalogenase-like hydrolase2 (kpn_04322) from klebsiella pneumoniae subsp. pneumoniae mgh 78578 at3 2.39 a resolution
Resolution2.39 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  TRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVLEA
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Template Sequence  YQVVASDLDGTLLSPDHFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRSYXITSNGARVHDSDGQQIFAH
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S




S
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TT

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GGGGS
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  DPMPVIKALQLIEMLNEHHIHGLMYVDDAMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFALTH
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Template Sequence  . NLDRDIAADLFEIVRNDPKIVTNVYREDEWYXNRHRPVFNY. . . . . . . . . . . . . . . . . . KLYEPGELDPQGISKVFFTC
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   82.......90.........100.........110.........120.. .......130.........140..
 
   163......170........ .180.........190.........200.........210.........220.........230.........240
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Query Sequence  DDLPQLQHFGKHVEHE. . LGLECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENVVAFGDNFNDISMLEAAGTGVAM
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Template Sequence  EDHEHLLPLEQAXNARWGDRVNVSFSTLTCLEVXAGGVSKGHALEAVAKXLGYTLSDCIAFGDGXNDAEXLSXAGKGCIX
Template Known Secondary structure  S
GGGSSTTTT
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   152.......160.........170.........180.........190.........200.........210.........220.........230.
 
   241........250.. .......260.........270..
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Query Sequence  GNADDAVKARAN. . IVIGDNTTDSIAQFIYSHLI
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Template Sequence  ANAHQRLKDLHPELEVIGSNADDAVPRYLRKLYL
Template Known Secondary structure  TTS

TTS


GGGTT
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   232.......240.........250.........260.....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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