Job Description P21829 Confidence 99.70% Date Thu Jan 5 11:38:33 GMT 2012 Rank 53 Aligned Residues 225 % Identity 18% Template c3j08A_ PDB info PDB header:hydrolase, metal transport Chain: A: PDB Molecule:copper-exporting p-type atpase a; PDBTitle: high resolution helical reconstruction of the bacterial p-type atpase2 copper transporter copa Resolution 10.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.										.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.
Query Sequence		T	T	R	V	I	A	L	D	L	D	G	T	L	L	T	P	K	K	T	L	.	.	.	.	.	.	.	.	.	L	P	S	S	I	E	A	L	A	R	A	R	E	A	G	Y	Q	L	I	I	V	T	G	R	H	H	V	A	I	H	P	F	Y	Q	A	L	A	L	D	T	P	A	I	C	C	N	G	T	Y	L	Y
Query Conservation																						.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.
Template Sequence		K	V	T	A	V	I	F	D	K	T	G	T	L	T	K	G	K	P	E	V	T	D	L	V	P	L	N	G	D	E	R	E	L	L	R	L	A	A	I	A	E	R	.	.	.	.	.	.	.	.	.	R	S	E	H	P	I	A	E	A	I	V	K	K	A	L	E	H	G	I	E	L	G	E	P	E	K	V	E	V
Template Known Secondary structure		G								G	G	G	T	S	S	S	S										S	S	S														T	.	.	.	.	.	.	.	.	.	T			S													T	T					S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.
Template SS confidence
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.										.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.														.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	Y	H	A	K	T	V	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	P	M	P	V	I	K	A	L	Q	L	I	E	M	L	N	E	H	H	I	H	G	L	M	Y	V	D	D	A	M	V	Y	E	H	P	T	G	H	V	I	R	T	S	N	W	A	Q	T	L	P	P	E	Q	R	P	T	F
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.
Template Sequence		I	A	G	E	G	V	V	A	D	G	I	L	V	G	N	K	R	L	M	E	D	F	G	V	A	V	S	N	E	V	E	L	A	L	E	K	L	E	R	E	A	K	T	A	V	I	V	A	R	N	G	R	.	.	.	.	.	.	.	.	.	V	E	G	I	I	A	V	S	D	T	L	K	E	S	A	K	P	A	V
Template Known Secondary structure			T	T	T					T	T												T	T																T	T	T									T	T		.	.	.	.	.	.	.	.	.												T	T	T
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.
Template SS confidence
		488	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.										540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	V	A	S	L	A	E	T	A	Q	Q	V	N	A	V	W	K	F	A	L	T	H	D	D	L	P	Q	L	Q	H	F	G	K	H	V	E	H	E	L	G	L	E	C	E	W	S	W	H	D	Q	V	D	I	A	R	G	G	N	S	K	G	K	R	L	T	K	W	V	E	A	Q	G	W	S	M	E	N	V	V
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.												.	.	.	.	.	.												.
Template Conservation					.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.												.	.	.	.	.	.												.
Template Sequence		Q	E	L	.	.	.	.	.	.	.	.	K	R	M	G	I	K	V	G	M	I	T	G	D	N	W	R	S	A	E	A	I	S	R	E	L	N	L	D	.	.	.	.	.	.	.	.	.	L	V	I	A	E	V	L	P	H	Q	K	.	.	.	.	.	.	S	E	E	V	K	K	L	Q	A	K	E	.	V	V	A
Template Known Secondary structure					.	.	.	.	.	.	.	.			T	T								S	S													T		S	.	.	.	.	.	.	.	.	.					S			T	T			.	.	.	.	.	.								T	T	T		.
Template Predicted Secondary structure					.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.												.	.	.	.	.	.												.
Template SS confidence
		559	560	.									.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.										590	.	.	.	.	.	.	.	.	.	600							.	.	.	.	.	.	.	.	.	610	.		.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	G	D	N	F	N	D	I	S	M	L	E	A	A	G	T	G	V	A	M	G	N	A	D	D	A	V	K	A	R	A	N	I	V	I	G	D	N	T	T	D	S	I	A	Q	F	I	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	V	G	D	G	I	N	D	A	P	A	L	A	Q	A	D	L	G	I	A	V	G	S	G	S	D	V	A	V	E	S	G	D	I	V	L	I	R	D	D	L	R	D	V	V	A	A	I	Q
Template Known Secondary structure						S	S	S								S	S									S			S	S			S	S	S			S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		615	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions