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Job DescriptionP21829
Confidence99.61%DateThu Jan 5 11:38:33 GMT 2012
Rank59Aligned Residues154
% Identity21%Templatec3b9bA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:sarcoplasmic/endoplasmic reticulum calcium PDBTitle: structure of the e2 beryllium fluoride complex of the serca2 ca2+-atpase
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40.........50.........60.........70.........80.........90...
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Query Sequence  LLTPKKTLLPSSIEALARAREAGYQLIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVLEADPMPVIKALQL
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Template Sequence  VVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGEN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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B
TTTT

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TSS
TT..............................
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   596...600.........610.........620.........630.........640.....
 
   94.....100.........110.........120.........130.........140.........150.........160.........170...
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Query Sequence  IEMLNEHHIHGLMYVDDAMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFALTHDDLPQLQHFGK
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . EEVADRAYTGREFDDLPLAEQREACRR. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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TTTS
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   646...650.........660.........670..
 
   174.....180.........190.........200.........210.........220.........230.........240.........250...
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Query Sequence  HVEHELGLECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENVVAFGDNFNDISMLEAAGTGVAMGNADDAVKARANI
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Template Sequence  . . . . . . . . . . . . . ACCFARVEPSHK. . . . . . SKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEM
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S

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STTSSSTTS

S
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   673......680.... .....690.........700.........710.........720.........730...
 
   254.....260.........
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Query Sequence  VIGDNTTDSIAQFIYS
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Template Sequence  VLADDNFSTIVAAVEE
Template Known Secondary structure  TT

T
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   734.....740.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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