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Job DescriptionP21829
Confidence99.48%DateThu Jan 5 11:38:33 GMT 2012
Rank67Aligned Residues149
% Identity23%Templatec3b8cB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:atpase 2, plasma membrane-type; PDBTitle: crystal structure of a plasma membrane proton pump
Resolution3.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30.........40.........50.........60.........70.........80.........90.......
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Query Sequence  KKTLLPSSIEALARAREAGYQLIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVLEADPMPVIKALQLIEML
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Template Sequence  FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIP. . . . . . . . . . . . . . .
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TT


SS
TTTT
TT

SSSSS

BGGGGTTS

S
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   486...490.........500.........510.........520.........530.........540.........550
 
   98.100.........110.........120.........130.........140.........150.........160.........170.......
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Query Sequence  NEHHIHGLMYVDDAMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFALTHDDLPQLQHFGKHVEH
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   551........
 
   178.180.........190.........200.........210.........220.........230.........240.........250.......
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Query Sequence  ELGLECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENVVAFGDNFNDISMLEAAGTGVAMGNADDAVKARANIVIGD
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Template Sequence  . . . . . . . . . . . GFAGVFPEHK. . . . . . YEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTE
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......TT



B


SSTTSSS



SSSGGG
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BSS
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   560......... 570.........580.........590.........600.........610.........620..
 
   258.260.........
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Query Sequence  NTTDSIAQFIYS
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Template Sequence  PGLSVIISAVLT
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STT
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   623......630....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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