Job Description P21829 Confidence 98.94% Date Thu Jan 5 11:38:33 GMT 2012 Rank 95 Aligned Residues 204 % Identity 15% Template c2yy6B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:phosphoglycolate phosphatase; PDBTitle: crystal structure of the phosphoglycolate phosphatase from aquifex2 aeolicus vf5 Resolution 2.30 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	I	A	L	D	L	D	G	T	L	L	T	P	K	K	T	L	L	P	S	S	I	E	A	L	A	R	A	R	E	A	G	Y	Q	L	I	I	V	T	G	R	H	H	V	A	I	H	P	F	Y	Q	A	L	A	L	D	T	P	A	I	C	C	N	G	T	Y	L	Y	D	Y	H	A	K	T	V	L	E	A	D
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	V	I	L	F	D	L	D	G	T	L	I	D	S	A	K	D	I	A	L	A	L	E	K	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	L	G	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								T	B	T	T	T																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T		G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.																										.	.	30	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	M	P	V	I	K	A	L	Q	L	I	E	M	L	N	E	H	H	I	H	G	L	M	Y	V	D	D	A	M	V	Y	E	H	P	T	G	H	V	I	R	T	S	N	W	A	Q	T	L	P	P	E	Q	R	P	T	F	T	Q	V	A	S	L	A	E	T	A	Q	Q	V	N	A	V	W	K	F	A	L	T	H	D
Query Conservation
Alig confidence		.	.	.	.	.	.																																																													.
Template Conservation		.	.	.	.	.	.																																																													.
Template Sequence		.	.	.	.	.	.	E	Y	Y	P	D	N	V	T	K	Y	I	G	G	G	V	R	A	L	L	E	K	V	L	K	D	K	F	R	E	E	Y	V	E	V	F	R	K	H	Y	L	E	N	P	V	V	Y	T	K	P	Y	P	E	I	P	Y	T	L	E	A	L	.	K	S	K	G	F	K	L	A	V	V	S	N	K
Template Known Secondary structure		.	.	.	.	.	.	G	G	S		T	T	G	G	G	T		S	S											G	G	G													S	T	T	S	S	S	S	S					T	T									.			T	T								S	S
Template Predicted Secondary structure		.	.	.	.	.	.																																																													.
Template SS confidence
								34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		D	L	P	Q	L	Q	H	F	G	K	H	V	E	H	E	L	G	L	E	C	E	W	S	W	H	D	Q	V	D	I	A	R	G	G	N	S	K	G	K	R	L	T	K	W	V	E	A	Q	G	W	S	M	E	N	V	V	A	F	G	D	N	F	N	D	I	S	M	L	E	A	A	G	T	.	G	V	A	M	G	N
Query Conservation																																																																											.
Alig confidence																										.	.	.	.																																														.
Template Conservation																										.	.	.	.
Template Sequence		L	E	E	L	S	K	K	I	L	D	I	L	N	L	S	G	Y	F	D	L	I	V	G	G	.	.	.	.	D	T	F	G	E	K	K	P	S	P	T	P	V	L	K	T	L	E	I	L	G	E	E	P	E	K	A	L	I	V	G	D	T	D	A	D	I	E	A	G	K	R	A	G	T	K	T	A	L	A	L	W
Template Known Secondary structure													T	T		G	G	G		S					T	.	.	.	.	T	S	S	S			S	S	S	S											T			G	G	G							S											T							T	T
Template Predicted Secondary structure																										.	.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130					.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		243	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		A	D	D	A	V	K	A	R	.	A	N	I	V	I	G	D	N	T	T	D	S	I	A	Q	F	I	Y
Query Conservation										.
Alig confidence										.											.	.
Template Conservation																					.	.
Template Sequence		G	Y	V	K	L	N	S	Q	I	P	D	F	T	L	S	R	P	S	D	.	.	L	V	K	L	X	D
Template Known Secondary structure		S					S	S				S				S	S				.	.					T
Template Predicted Secondary structure																					.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.			.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions