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Job DescriptionP21829
Confidence98.40%DateThu Jan 5 11:38:33 GMT 2012
Rank126Aligned Residues194
% Identity12%Templatec2i6xA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:hydrolase, haloacid dehalogenase-like family; PDBTitle: the structure of a predicted had-like family hydrolase from2 porphyromonas gingivalis.
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  TRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVLEA
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Template Sequence  IRNIVFDLGGVLIHLN. . . . . . . . . . . . . . . . . . . . . . . . . . . . REESIRRFKAIGVA. . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 
S
SBTTT
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T......................
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   2.......10....... ..20.........30.
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  DPMPVIKALQLIEMLNEHHIHGLMYVDDAMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFALTH
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Template Sequence  . . . DIEEXLDPKGLFLDLESGRKSEEEFRTELSRYIGKELTYQQVYDALLGFLEEISAEKFDYIDSLRPDYRLFLLSNTN
Template Known Secondary structure  ...TT



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   32.......40.........50.........60.........70.........80.........90.........100........
 
   163......170.........180.........190.........200.........210.........220.........230..... ....240.
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Query Sequence  DDLPQLQHFGKHVEHELGLECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENVVAFGDNFNDISMLEAAG. TGVAMG
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Template Sequence  PYVLDLAXSPRFLPSGRTLDSFFDKVYASCQXGKYKPNEDIFLEXIADSGXKPEETLFIDDGPANVATAERLGFHTYCPD
Template Known Secondary structure  TSTTSSTT


GGGGSST

TTS


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   112.......120.........130.........140.........150.........160.........170.........180.........190.
 
   242.......
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Query Sequence  NADDAVKA
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Template Sequence  NGENWIPA
Template Known Secondary structure  TT


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   192.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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