Job Description P21829 Confidence 99.60% Date Thu Jan 5 11:38:33 GMT 2012 Rank 60 Aligned Residues 233 % Identity 12% Template c1zjjA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:hypothetical protein ph1952; PDBTitle: crystal structure of hypothetical protein ph1952 from pyrococcus2 horikoshii ot3 Resolution 1.85 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	V	I	A	L	D	L	D	G	T	L	L	T	P	K	K	T	L	L	P	S	S	I	E	A	L	A	R	A	R	E	A	G	Y	Q	L	I	I	V	T	G	R	H	H	V	A	I	H	P	F	Y	Q	A	L	A	L	D	T	P	A	I	C	C	N	G	T	Y	L	Y	D	Y	H	A	K	T	V	L	E	A
Query Conservation
Alig confidence																					.																																																			.	.	.	.	.	.	.	.	.	.
Template Conservation																					.																																																			.	.	.	.	.	.	.	.	.	.
Template Sequence		M	V	A	I	I	F	D	M	D	G	V	L	Y	R	G	N	R	A	I	.	P	G	V	R	E	L	I	E	F	L	K	E	R	G	I	P	F	A	F	L	T	N	N	S	T	K	T	P	E	M	Y	R	E	K	L	L	K	M	G	I	D	V	S	S	S	I	I	I	T	S	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										B	T	T	T			T	T				.	T	T												T								S			S	S											T	T	T					G	G	G					.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.																																																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	M	P	V	I	K	A	L	Q	L	I	E	M	L	N	E	H	H	I	H	G	L	M	Y	V	D	D	A	M	V	Y	E	H	P	T	G	H	V	I	R	T	S	N	W	A	Q	T	L	P	P	E	Q	R	P	T	F	T	Q	V	A	S	L	A	E	T	A	Q	Q	V	N	A	V	W	K	F	A	L	T	H
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	A	T	R	L	Y	M	S	K	H	L	D	P	G	K	I	F	V	I	G	G	E	G	L	V	K	E	M	Q	A	L	G	W	G	I	V	T	L	D	E	A	R	Q	G	S	W	K	E	V	K	H	V	V	V	G	L	D	P	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												S									S												T	S		B								T	T	G	G	G	G										T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																						70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.																					.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	D	L	P	Q	L	Q	H	F	G	K	H	V	E	H	E	L	G	L	E	C	E	W	S	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	D	Q	V	D	I	A	R	G	G	N	S	K	G	K	R	L	T	K	W	V	E	A	Q	G	W	S	M	E	N	V	V	A	F	G
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	T	Y	E	K	L	K	Y	A	T	L	A	I	R	N	G	A	T	F	I	G	T	N	P	D	A	T	L	P	G	E	E	G	I	Y	P	G	A	G	S	I	I	A	A	L	K	V	A	T	N	V	E	P	I	I	I	G	K	P	N	E	P	M	Y	E	V	V	R	E	M	F	P	G	E	E	L	W	M	V	G
Template Known Secondary structure																T	T						S				S					T	T																									S	T	T	S											S	T	T
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		223	.		.	.	.	.	.	230	.	.	.	.	.	.				.	.	.	240	.	.	.	.	.	.	.	.	.	250					.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure				.													.	.	.															.	.	.	.
Query SS confidence				.													.	.	.															.	.	.	.
Query Sequence		D	N	.	F	N	D	I	S	M	L	E	A	A	G	T	.	.	.	G	V	A	M	G	N	A	D	D	A	V	K	A	R	.	.	.	.	A	N	I	V	I	G	D	N	T	T	D	S	I	A	Q	F	I	Y
Query Conservation				.													.	.	.															.	.	.	.
Alig confidence				.													.	.	.															.	.	.	.											.	.
Template Conservation																																																.	.
Template Sequence		D	R	L	D	T	D	I	A	F	A	K	K	F	G	M	K	A	I	M	V	L	T	G	V	S	S	L	E	D	I	K	K	S	E	Y	K	P	D	L	V	L	P	S	V	Y	E	.	.	L	I	D	Y	L	K
Template Known Secondary structure		S		T	T	T								T	T							S	S	S	S							T	T		S	S			S				S	S	G	G	G	.	.	G	G	G	G	G
Template Predicted Secondary structure																																																.	.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.			.	.	.	.	260	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions