Job Description P43676 Confidence 12.29% Date Thu Jan 5 12:02:30 GMT 2012 Rank 19 Aligned Residues 87 % Identity 11% Template d1s7ba_ SCOP info Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE Multidrug resistance efflux transporter EmrE Resolution 3.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	M	A	A	F	F	N	F	F	G	V	L	L	G	G	L	S	V	A	Y	A	I	V	H	M	L	P	T	D	L	L	L	N	M	G	S	T	H	G	L	A	M	V	F	S	M	L	L	A	A	I	I	W	N	L	G	T	W	F	F	G	L	P	A	S	S	S	H	T	L	I	G	A	I	I	G	I	G	L
Query Conservation
Alig confidence																			.	.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	G	A	I	L	A	E	V	I	G	T	T	L	M	K	F	.	.	S	E	G	F	T	R	L	W	P	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	G	T	I	I	C	Y	C	A	S	F	W	L	L	A	Q	T	L	A	Y	I	P	T	G	I	A	Y	A	I	W	S	G	V	G	I	V	L	I
Template Known Secondary structure																			.	.							S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	S	S																			S	S		S		S	S		S
Template Predicted Secondary structure																			.	.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.														.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	A	L	L	T	G	S	S	V	M	D	A	L	N	L	R	E	V	T	K	I	F	S
Query Conservation
Alig confidence							.	.
Template Conservation							.	.
Template Sequence		S	L	L	S	W	.	.	G	F	F	G	Q	R	L	D	L	P	A	I	I	G	M	M	L
Template Known Secondary structure					T		.	.		S					T	T
Template Predicted Secondary structure							.	.
Template SS confidence
		72	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions