Job Description P43676 Confidence 29.93% Date Thu Jan 5 12:02:30 GMT 2012 Rank 2 Aligned Residues 175 % Identity 13% Template d1j4na_ SCOP info Aquaporin-like Aquaporin-like Aquaporin-like Resolution 2.20

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.						.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.
Query SS confidence																																		.	.	.	.	.
Query Sequence		G	L	L	L	L	L	A	L	A	F	V	L	F	Y	E	A	I	N	G	F	H	D	T	A	N	A	V	A	A	V	I	Y	.	.	.	.	.	T	R	A	M	Q	P	Q	L	A	V	V	M	A	A	F	F	N	F	F	G	V	L	L	G	G	L	S	V	A	Y	A	I	V	H	M	L	P	T	D	L	L	L	N
Query Conservation																																		.	.	.	.	.
Alig confidence																																		.	.	.	.	.													.
Template Conservation																																																			.
Template Sequence		N	V	K	V	S	L	A	F	G	L	S	I	A	T	L	A	Q	S	V	G	H	I	S	G	A	H	L	N	P	A	V	T	L	G	L	L	L	S	C	Q	I	S	V	L	R	A	I	M	Y	.	I	I	A	Q	C	V	G	A	I	V	A	T	A	I	L	S	G	I	T	S	S	L	P	D	N	S	L	G	L	N
Template Known Secondary structure																																							T	T	S	S									.																			T	T	T		T	T			T	T
Template Predicted Secondary structure																																																			.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		88	.	90	.								.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.											.	.	.	.	150
Predicted Secondary structure						.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.	.	.	.
Query Sequence		M	G	S	T	.	.	.	.	.	.	.	H	G	L	A	M	V	F	S	M	L	L	A	A	I	I	W	N	L	G	T	W	F	F	G	L	P	A	S	S	S	H	T	L	I	G	A	I	I	G	I	G	L	T	N	A	L	L	T	G	S	S	V	M	D	.	.	.	.	.	.	.	.	.	.	A	L	N	L	R
Query Conservation						.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	A	P	G	V	N	S	G	Q	G	L	G	I	E	I	I	G	T	L	Q	L	V	L	C	V	L	A	T	T	D	R	R	R	R	D	L	G	G	S	G	P	L	A	I	G	F	S	V	A	L	G	H	L	L	A	I	D	Y	T	G	C	G	I	N	P	A	R	S	F	G	S	S	V	I	T	H	N	F	Q
Template Known Secondary structure					T	T			T	T	G	G	G																		T		S	S						S																																					T	T			T
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	T	K	I	F	S	S	L	I	V	S	P	I	V	G	L	V	I	A	G	G	L	I	F	L	L	R	R	Y	W	S	G	T	K	K	R	D	R	I	H	R	I	P	E	D
Query Conservation
Alig confidence					.	.	.				.															.	.	.	.
Template Conservation					.	.	.				.															.	.	.	.
Template Sequence		D	H	W	.	.	.	I	F	W	.	V	G	P	F	I	G	A	A	L	A	V	L	I	Y	.	.	.	.	D	F	I	L	A	P	R	S	S	D	L	T	D	R	V	K	V	W
Template Known Secondary structure		T	T	T	.	.	.				.															.	.	.	.		T	T	T	S			S	S							G	G	G
Template Predicted Secondary structure					.	.	.				.															.	.	.	.
Template SS confidence
		210	.	.				.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.					230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions