Job Description P43676 Confidence 6.50% Date Thu Jan 5 12:02:30 GMT 2012 Rank 54 Aligned Residues 175 % Identity 18% Template c3d9sB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:aquaporin-5; PDBTitle: human aquaporin 5 (aqp5) - high resolution x-ray structure Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	L	F	V	G	L	D	I	Y	T	G	L	L	L	L	L	A	L	A	F	V	L	F	Y	E	A	I	N	G	F	H	D	T	A	N	A	V	A	A	V	I	Y	T	R	A	M	Q	P	Q	L	A	V	V	M	A	A	F	F	N	F	F	G	V	L	L	G	G	L	S	V	A	Y	A	I	V	H	M	L	P
Query Conservation
Alig confidence																																																										.
Template Conservation																																																										.
Template Sequence		P	S	A	L	P	T	I	L	Q	I	A	L	A	F	G	L	A	I	G	T	L	A	Q	A	L	G	P	V	S	G	G	H	I	N	P	A	I	T	L	A	L	L	V	G	N	Q	I	S	L	L	R	A	F	F	Y	V	.	A	A	Q	L	V	G	A	I	A	G	A	G	I	L	Y	G	V	A	P	L	N	A	R
Template Known Secondary structure		T	T	S																																									T	T		S										.																		S
Template Predicted Secondary structure																																																										.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		82	.	.	.	.	.	.	.	90	.								.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.								.	.
Predicted Secondary structure												.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.
Query Sequence		T	D	L	L	L	N	M	G	S	T	.	.	.	.	.	.	.	H	G	L	A	M	V	F	S	M	L	L	A	A	I	I	W	N	L	G	T	W	F	F	G	L	P	A	S	S	S	H	T	L	I	G	A	I	I	G	I	G	L	T	N	A	L	L	T	G	S	S	V	M	D	.	.	.	.	.	.	.	A	L
Query Conservation												.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.																																																							.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	N	L	A	V	N	A	L	N	N	N	T	T	Q	G	Q	A	M	V	V	E	L	I	L	T	F	Q	L	A	L	C	I	F	A	S	T	D	S	R	R	T	S	P	V	G	S	P	A	L	S	I	G	L	S	V	T	L	G	H	L	V	G	I	Y	F	T	G	C	S	M	N	P	A	R	S	F	G	P	A	V
Template Known Secondary structure		T	T	T	T						T	T	S																								T		S	S			S																									S			S	S
Template Predicted Secondary structure
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	R	E	V	T	K	I	F	S	S	L	I	V	S	P	I	V	G	L	V	I	A	G	G	L	I	F	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	M	N	R	F	S	P	A	H	W	V	F	W	V	G	P	I	V	G	A	V	L	A	A	I	L	Y	F	Y	L
Template Known Secondary structure			T	T				T	T	T	T																			T	T
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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