Job Description P77615 Confidence 91.93% Date Thu Jan 5 12:31:04 GMT 2012 Rank 186 Aligned Residues 40 % Identity 33% Template c6paxA_ PDB info PDB header:gene regulation/dna Chain: A: PDB Molecule:homeobox protein pax-6; PDBTitle: crystal structure of the human pax-6 paired domain-dna2 complex reveals a general model for pax protein-dna3 interactions Resolution 2.50 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.																	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	I	Y	D	I	A	R	V	A	G	V	S	K	S	T	V	S	R	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	K	Q	T	N	I	S	P	E	A	R	E	K	V	L	R	A	I	E	E
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	P	C	D	I	S	R	I	L	Q	V	S	N	G	C	V	S	K	I	L	G	R	Y	Y	A	T	G	S	I	R	P	R	A	I	G	G	S	K	P	R	V	A	T	P	E	V	V	S	K	I	A	Q	Y	K	Q	E
Template Known Secondary structure											T																	S			S					S					S	S	S
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions