Job Description P77615 Confidence 98.48% Date Thu Jan 5 12:31:04 GMT 2012 Rank 80 Aligned Residues 239 % Identity 10% Template c3s99A_ PDB info PDB header:lipid binding protein Chain: A: PDB Molecule:basic membrane lipoprotein; PDBTitle: crystal structure of a basic membrane lipoprotein from brucella2 melitensis, iodide soak Resolution 2.05 Å

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.
Query SS confidence																																				.	.
Query Sequence		A	I	M	V	I	S	T	R	S	T	K	T	T	A	G	N	P	F	F	S	E	V	L	H	A	I	T	A	K	A	E	E	E	G	.	.	F	D	V	I	L	Q	T	S	H	N	P	A	E	D	L	Q	K	C	E	S	K	I	K	Q	K	M	I	K	G	I	I	M	L	S	S	P	A	D	E	S	F	F	A	Q
Query Conservation																																				.	.
Alig confidence															.	.	.																			.	.
Template Conservation															.	.	.
Template Sequence		K	V	G	F	I	Y	I	G	P	P	G	D	F	.	.	.	G	W	T	Y	Q	H	D	Q	A	R	K	E	L	V	E	A	L	G	D	K	V	E	T	T	F	L	E	N	V	A	E	G	A	D	A	E	R	S	I	K	R	I	A	R	A	G	N	K	L	I	F	T	T	S	F	G	Y	M	D	P	T	V	K	V
Template Known Secondary structure								S	S		G	G	G	S	.	.	.	S																	T	T	T								S			T	T													T	T		S						S	G	G	G
Template Predicted Secondary structure															.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	K	Y	D	I	P	V	V	V	I	G	K	V	E	G	Q	Y	A	H	V	Y	S	V	D	T	D	N	F	G	D	S	I	A	L	T	D	A	L	I	E	S	G	H	Q	N	I	A	C	L	H	A	P	L	D	V	H	V	S	V	D	R	V	N	G	Y	K	Q	S	L	A	A	H	N	I	A	V	R	D	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	K	F	P	D	V	K	F	E	H	A	T	G	Y	K	T	A	D	N	M	S	A	Y	N	A	R	F	Y	E	G	R	Y	V	Q	G	V	I	A	A	K	M	S	K	K	G	I	A	G	Y	I	G	S	V	P	V	P	E	V	V	Q	G	I	N	S	F	M	L	G	A	Q	S	V	N	P	D	F	R	V	K
Template Known Secondary structure			T	T		T	T	S						S					B	T	T																								S	S																											T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	I	V	D	G	G	Y	T	H	E	T	A	L	K	A	A	R	Q	L	L	S	Q	S	P	L	P	E	A	V	F	A	T	D	S	L	K	L	M	S	I	Y	R	A	A	A	E	K	N	I	A	I	P	Q	Q	L	A	V	V	G	Y	S	N	E	T	L	S	F	I	L	T	P	A	P	G	G	I	D	V	P	T
Query Conservation
Alig confidence																									.											.	.															.	.	.	.	.	.
Template Conservation																									.											.	.															.	.	.	.	.	.
Template Sequence		V	I	W	V	N	S	W	F	D	P	G	K	E	A	D	A	A	K	A	L	I	D	Q	.	G	V	D	I	I	T	Q	H	T	D	.	.	S	T	A	A	I	Q	V	A	H	D	R	G	I	K	.	.	.	.	.	.	A	F	G	Q	A	S	D	M	I	K	F	A	P	D	T	Q	L	T	A	V	V	D	E	W
Template Known Secondary structure						S	S	S																T	.	T		S					S	S	S	.	.	S	S									T	T			.	.	.	.	.	.						S			G	G	G	S	T	T	T
Template Predicted Secondary structure																									.											.	.															.	.	.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.			.	.	.	.	.	.	.	.	220	.	.	.	.	.							.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	L	G	Q	Q	S	C	E	L	L	F	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	P	Y	Y	I	D	R	A	K	A	V	L	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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