Return to main results Retrieve Phyre Job Id

Job DescriptionP77615
Confidence87.76%DateThu Jan 5 12:31:04 GMT 2012
Rank366Aligned Residues42
% Identity26%Templatec3oioA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:transcriptional regulator (arac-type dna-binding domain- PDBTitle: crystal structure of transcriptional regulator (arac-type dna-binding2 domain-containing proteins) from chromobacterium violaceum
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.. .......40....
Predicted Secondary structure 











...
Query SS confidence 





























. . .











Query Sequence  PTIYDIARVAGVSKSTVSRVLNKQTNISPE. . . AREKVLRAIEEL
Query Conservation   

 


  



  






    

  ...

 

   
 

Alig confidence 





























...











Template Conservation   
   

     
   
   
    
 
        
       
Template Sequence  LSTDDIAYYVGVSRRQLERLFKQYLGTVPSKYYLELRLNRARQLL
Template Known Secondary structure 

TS
TSS
Template Predicted Secondary structure 







Template SS confidence 












































   236...240.........250.........260.........270.........280
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions