Job Description P77615 Confidence 99.82% Date Thu Jan 5 12:31:04 GMT 2012 Rank 57 Aligned Residues 262 % Identity 15% Template c2x7xA_ PDB info PDB header:transferase Chain: A: PDB Molecule:sensor protein; PDBTitle: fructose binding periplasmic domain of hybrid two component2 system bt1754 Resolution 2.64 Å

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.
Predicted Secondary structure																																			.																																								.	.
Query SS confidence																																			.																																								.	.
Query Sequence		A	I	M	V	I	S	T	R	S	T	K	T	T	A	G	N	P	F	F	S	E	V	L	H	A	I	T	A	K	A	E	E	E	.	G	F	D	V	I	L	Q	T	S	H	N	P	A	E	D	L	Q	K	C	E	S	K	I	K	Q	K	M	I	K	G	I	I	M	L	S	S	P	A	D	.	.	E	S	F	F	A
Query Conservation																																			.																																								.	.
Alig confidence									.	.	.	.	.	.																					.																																								.	.
Template Conservation									.	.	.	.	.	.
Template Sequence		R	I	G	V	A	Q	C	.	.	.	.	.	.	S	D	D	S	W	R	H	K	M	N	D	E	I	L	R	E	A	M	F	Y	N	G	V	S	V	E	I	R	S	A	G	D	D	N	S	K	Q	A	E	D	V	H	Y	F	M	D	E	G	V	D	L	L	I	I	S	A	N	E	A	A	P	M	T	P	I	V	E
Template Known Secondary structure								S	.	.	.	.	.	.			S															T	T	S	S	S									T	T															T	T		S							S	S
Template Predicted Secondary structure									.	.	.	.	.	.
Template SS confidence
		34	.	.	.	.	.	40							.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																																													.	.
Query SS confidence																																													.	.
Query Sequence		Q	L	D	K	Y	D	I	P	V	V	V	I	G	K	V	E	G	Q	Y	A	H	V	Y	S	V	D	T	D	N	F	G	D	S	I	A	L	T	D	A	L	I	E	S	.	.	G	H	Q	N	I	A	C	L	H	A	P	L	D	V	H	V	S	V	D	R	V	N	G	Y	K	Q	S	L	A	A	H	N	I	A	V
Query Conservation																																													.	.
Alig confidence																																													.	.																																	.
Template Conservation																																																																															.
Template Sequence		E	A	Y	Q	K	G	I	P	V	I	L	V	D	R	K	I	L	S	D	K	Y	T	A	Y	I	G	A	D	N	Y	E	I	G	R	S	V	G	N	Y	I	A	S	S	L	K	G	K	G	N	I	V	E	L	T	G	L	S	G	S	T	P	A	M	E	R	H	Q	G	F	M	A	A	I	S	K	F	P	.	D	I
Template Known Secondary structure						T	T							S	S			S	S	S		S	S																						T	T	T									S		T	T	S																T		T	.
Template Predicted Secondary structure																																																																															.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.					.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure																																																																			.	.	.	.
Query SS confidence																																																																			.	.	.	.
Query Sequence		R	D	E	W	I	V	D	G	G	Y	T	H	E	T	A	L	K	A	A	R	Q	L	L	S	Q	S	P	L	P	E	A	V	F	A	T	D	S	L	K	L	M	S	I	Y	R	A	A	A	E	K	N	I	A	I	P	Q	Q	L	A	V	V	G	Y	S	N	.	.	.	.	E	T	L	S	F	I	L	T	P	A	P
Query Conservation																																																																			.	.	.	.
Alig confidence																																																					.	.													.	.	.	.
Template Conservation																																																					.	.
Template Sequence		K	L	I	D	K	A	D	A	A	W	E	R	G	P	A	E	I	E	M	D	S	M	L	R	R	H	P	K	I	D	A	V	Y	A	H	N	D	R	I	A	P	G	A	Y	Q	A	A	K	M	A	G	.	.	R	E	K	E	M	I	F	V	G	I	D	A	L	P	G	K	G	N	G	L	E	L	V	L	D	S	V
Template Known Secondary structure										T	T	S																S								S	S	T	T												T	T	.	.		T	T	S	S										S	T	T	S							T	T	S
Template Predicted Secondary structure																																																					.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.			.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	I	D	V	P	T	Q	E	L	G	Q	Q	S	C	E	L	L	F	R	L	I	S	G	K	P	S	P	Q	N	I	T	V	A	T	H	M	T	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	A	T	F	I	Y	P	T	N	G	D	K	V	L	Q	L	A	M	D	I	L	E	K	K	P	Y	P	K	E	T	V	M	N	T	A	V	V	D	R
Template Known Secondary structure			S																					T	T					S											T
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions