Job Description P77615 Confidence 99.95% Date Thu Jan 5 12:31:04 GMT 2012 Rank 18 Aligned Residues 266 % Identity 18% Template c2rgyA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, laci family; PDBTitle: crystal structure of transcriptional regulator of laci family from2 burkhoderia phymatum Resolution 2.05 Å

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.				.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.
Query SS confidence																																																		.	.	.
Query Sequence		D	A	I	M	V	I	S	T	R	S	T	K	T	T	A	G	N	P	F	F	S	E	V	L	H	A	I	T	A	K	A	E	E	E	G	F	D	V	I	L	Q	T	S	H	N	P	A	E	.	.	.	D	L	Q	K	C	E	S	K	I	K	Q	K	M	I	K	G	I	I	M	L	S	S	P	A	D	E	S	F	F
Query Conservation																																																		.	.	.
Alig confidence											.	.	.	.	.																																			.	.	.
Template Conservation											.	.	.	.	.
Template Sequence		G	I	I	G	L	F	V	P	T	.	.	.	.	.	F	F	G	S	Y	Y	G	T	I	L	K	Q	T	D	L	E	L	R	A	V	H	R	H	V	V	V	A	T	G	C	G	E	S	T	P	R	E	Q	A	L	E	A	V	R	F	L	I	G	R	D	C	D	G	V	V	V	I	S	H	D	L	H	D	E	D	L
Template Known Secondary structure									S		.	.	.	.	.	S		S																	T	T										S	S	S																T	T		S							S	S	S
Template Predicted Secondary structure											.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.						.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	L	D	K	Y	D	I	P	V	V	V	I	G	K	V	E	G	Q	Y	A	H	V	Y	S	V	D	T	D	N	F	G	D	S	I	A	L	T	D	A	L	I	E	S	G	H	Q	N	I	A	C	L	H	A	P	L	D	V	H	V	S	V	D	R	V	N	G	Y	K	Q	S	L	A	A	H	N	I	A	V	R
Query Conservation
Alig confidence																																														.
Template Conservation																																														.
Template Sequence		D	E	L	H	R	X	H	P	K	X	V	F	L	N	R	A	F	D	A	L	P	D	A	S	F	C	P	D	H	R	R	G	G	E	L	A	A	A	T	L	I	E	H	G	.	H	R	K	L	A	V	I	S	G	P	F	T	A	S	D	N	V	E	R	L	D	G	F	F	D	E	L	A	R	H	G	I	A	R	D
Template Known Secondary structure									S	S					S	S			T	T	S	G	G	G																				T	T	.			S						S		T	T																	T	T	T			G	G
Template Predicted Secondary structure																																														.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	W	I	V	D	G	G	Y	T	H	E	T	A	L	K	A	A	R	Q	L	L	S	Q	S	P	L	P	E	A	V	F	A	T	D	S	L	K	L	M	S	I	Y	R	A	A	A	E	K	N	I	A	I	P	Q	Q	L	A	V	V	G	Y	S	N	E	T	L	S	F	I	L	T	P	A	P	G	G	I	D	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	P	L	I	E	S	D	F	S	P	E	G	G	Y	A	A	T	C	Q	L	L	E	S	K	A	P	F	T	G	L	F	C	A	N	D	T	X	A	V	S	A	L	A	R	F	Q	Q	L	G	I	S	V	P	G	D	V	S	V	I	G	Y	D	D	D	Y	S	A	A	Y	A	A	P	A	L	T	S	V	H	I
Template Known Secondary structure		G	S							S	S															T				S					S	S														T	T			T	T	T	T										T	T	S	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	Q	E	L	G	Q	Q	S	C	E	L	L	F	R	L	I	S	G	K	P	S	P	Q	N	I	T	V	A	T	H	M	T	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	T	A	E	L	T	Q	N	A	V	R	W	L	I	N	Q	C	Y	G	T	K	W	E	I	F	R	E	F	P	V	T	V	S	X	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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