Job Description P77615 Confidence 78.98% Date Thu Jan 5 12:31:04 GMT 2012 Rank 465 Aligned Residues 41 % Identity 24% Template c1p4xA_ PDB info PDB header:transcription Chain: A: PDB Molecule:staphylococcal accessory regulator a homologue; PDBTitle: crystal structure of sars protein from staphylococcus aureus Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.																.	.	.	.					.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.
Query Sequence		T	I	Y	D	I	A	R	V	A	G	V	S	K	S	T	V	S	R	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	K	Q	T	.	.	.	.	N	I	S	P	E	A	R	E	K	V	L	R	A	I	E	E	L
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.
Template Conservation
Template Sequence		P	F	K	K	I	V	S	D	L	C	Y	K	Q	S	D	L	V	Q	H	I	K	V	L	V	K	H	S	Y	I	S	K	V	R	S	K	I	D	E	R	N	T	Y	I	S	I	S	E	E	Q	R	E	K	I	A	E	R	V	T	L	F
Template Known Secondary structure										S	S	S		G	G	G	T										T	T	S							S	S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions