Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAI1
Confidence96.59%DateThu Jan 5 11:12:59 GMT 2012
Rank266Aligned Residues106
% Identity23%Templatec3b9pA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:cg5977-pa, isoform a; PDBTitle: spastin
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   35....40.........50.........60.........70.........80.........90.........100.........110....
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Query Sequence  PAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDVLAGTTPLAEIQEDTRMMFQDARLLPWKSVIDNVGLGLKGQWRDAAR
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Template Sequence  APAKGLLLFGPPGNGKTLLARAVATECSAT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   514.....520.........530.........540...
 
   115....120.........130.........140.........150......... 160.........170.........180.........190..
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Query Sequence  RALAAVGLENRAGEWPAALSGGQKQRVALARALIHRPGLLLLDEP. . LGALDALTRLEMQDLIVSLWQEHGFTVLLVTHD
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Template Sequence  . . . . FLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSEREASRRLKTEFLVEFDGLPRIVVLAATNR
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   544.....550.........560.........570.........580.........590.........600.........610.........
 
   193.
Predicted Secondary structure 
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Query Sequence  VS
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Template Sequence  PQ
Template Known Secondary structure  GG
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   631.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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