Job Description P0AAI1 Confidence 100.00% Date Thu Jan 5 11:12:59 GMT 2012 Rank 24 Aligned Residues 224 % Identity 32% Template c2yz2B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:putative abc transporter atp-binding protein tm_0222; PDBTitle: crystal structure of the abc transporter in the cobalt transport2 system Resolution 2.30 Å

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		12	.	.	.	.	.	.	.	20	.	.	.						.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.
Predicted Secondary structure														.	.	.	.	.																																																						.	.
Query SS confidence														.	.	.	.	.																																																						.	.
Query Sequence		L	L	L	N	A	V	S	K	H	Y	A	E	.	.	.	.	.	N	I	V	L	N	Q	L	D	L	H	I	P	A	G	Q	F	V	A	V	V	G	R	S	G	G	G	K	S	T	L	L	R	L	L	A	G	L	E	T	P	T	A	G	D	V	L	A	G	T	T	P	L	A	.	.	E	I	Q	E	D	T	R	M
Query Conservation														.	.	.	.	.																																																						.	.
Alig confidence														.	.	.	.	.																																																						.	.
Template Conservation
Template Sequence		I	E	V	V	N	V	S	H	I	F	H	R	G	T	P	L	E	K	K	A	L	E	N	V	S	L	V	I	N	E	G	E	C	L	L	V	A	G	N	T	G	S	G	K	S	T	L	L	Q	I	V	A	G	L	I	E	P	T	S	G	D	V	L	Y	D	G	E	R	K	K	G	Y	E	I	R	R	N	I	G	I
Template Known Secondary structure												T	T	T	S	T	T														T	T								S	T	T											T	T	S	S			S							T	T									G	G	G
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		85	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.								.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure						.																															.	.	.	.	.	.	.
Query SS confidence						.																															.	.	.	.	.	.	.
Query Sequence		M	F	Q	D	.	A	R	L	L	P	W	K	S	V	I	D	N	V	G	L	G	L	K	G	Q	W	R	D	A	A	R	R	A	L	A	.	.	.	.	.	.	.	A	V	G	L	E	N	R	A	G	E	W	P	A	A	L	S	G	G	Q	K	Q	R	V	A	L	A	R	A	L	I	H	R	P	G	L	L	L	L
Query Conservation						.																															.	.	.	.	.	.	.
Alig confidence						.																															.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	F	Q	Y	P	E	D	Q	F	F	A	E	R	V	F	D	E	V	A	F	A	V	K	N	F	Y	P	D	R	D	P	V	P	L	V	K	K	A	M	E	F	V	G	L	D	F	D	S	F	K	D	R	V	P	F	F	L	S	G	G	E	K	R	R	V	A	I	A	S	V	I	V	H	E	P	D	I	L	I	L
Template Known Secondary structure				S	S	G	G	G	G				S	S														T	T	S														T							T	T	S		G	G	G	S															T	T			S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	P	L	G	A	L	D	A	L	T	R	L	E	M	Q	D	L	I	V	S	L	W	Q	E	H	G	F	T	V	L	L	V	T	H	D	V	S	E	A	V	A	M	A	D	R	V	L	L	I	E	E	G	K	I	G	L	D	L	T	V	D	I	P	R	P	R	R	L	G	S	V	R	L	A	E	L	E	A	E
Query Conservation
Alig confidence																								.
Template Conservation																								.
Template Sequence		D	E	P	L	V	G	L	D	R	E	G	K	T	D	L	L	R	I	V	E	K	W	.	K	T	L	G	K	T	V	I	L	I	S	H	D	I	E	T	V	I	N	H	V	D	R	V	V	V	L	E	K	G	K	K	V	F	D	G	T	R	M	E	F	L	E	K	Y	D	P	R	F	F	T	S	K	M	L	V	M
Template Known Secondary structure			S	T	T	T	T																	.			T	T								S						G	G	G		S							T	T															S			T	T
Template Predicted Secondary structure																								.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions