Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAI1
Confidence97.68%DateThu Jan 5 11:12:59 GMT 2012
Rank128Aligned Residues152
% Identity13%Templatec2q6tB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:dnab replication fork helicase; PDBTitle: crystal structure of the thermus aquaticus dnab monomer
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50.........60.........70.........80.........90.........100.........110...
Predicted Secondary structure 


















































Query SS confidence 















































































Query Sequence  IPAGQFVAVVGRSGGGKSTLLRLLAGLETPTAGDVLAGTTPLAEIQEDTRMMFQDARLLPWKSVIDNVGLGLKGQWRDAA
Query Conservation 
  

   


 








  
 
      
 
                           
   

            
Alig confidence 




































......




































Template Conservation     
 
  
 
 

 


     

   
   
  

......  
 
        
                       
Template Sequence  LGPGSLNIIAARPAMGKTAFALTIAQNAALKEGVGVG. . . . . . IYSLEMPAAQLTLRMMCSEARIDMNRVRLTDRDFSRL
Template Known Secondary structure 

TT

TTSSS

......
SS
TT

GGGT


Template Predicted Secondary structure 













......











Template SS confidence 















































































   197..200.........210.........220.........230... ......240.........250.........260.........270
 
   114.....120.........130.........140.........150......... 160.........170.........180.........190
Predicted Secondary structure 































...







Query SS confidence 













































. . .






























Query Sequence  RRALAAVGLENRAGEWPAALSGGQKQRVALARALIHRPGLLLLDEP. . . LGALDALTRLEMQDLIVSLWQEHGFTVLLVT
Query Conservation                     

            
   
   




...
 


      
   
  
    
 


 

Alig confidence 













































...






























Template Conservation        
      
          
   
          




 
              
   

 

      

   
Template Sequence  VDVASRLSEAPIYIDDTPDLTLMEVRARARRLVSQNQVGLIIIDYLQLMSGPNRQQEIAAISRGLKALARELGIPIIALS
Template Known Secondary structure  TT



TT
B

GGG
B


TS
Template Predicted Secondary structure 



















Template SS confidence 















































































   274.....280.........290.........300.........310.........320.........330.........340.........350...
 
   191
Predicted Secondary structure 
Query SS confidence 
Query Sequence  H
Query Conservation 
Alig confidence 
Template Conservation 
Template Sequence  Q
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   361
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions